G204572


Basic Information

Item Value
gene id G204572
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 688996 ~ 689533 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU232195
CTCATTTCCTTTCCTACTCTTTTCTTTTGCCTTATCGTAGCTATATGTTTTTTCAACTGAAAGCATTTCTGCTGTGATAACACAGAAAAAATATACGTTTTACGTGCCCACACAACTGAAGCAACGAATTTGTCAGTATCTGGGAAATAATCAGCAACATTTACCTTTCTACCTTTTGTTTCATCCAAAAACTCATTATTTTGTTCCACAGTGTATAAATTATCACCTACTTTTGGACAATCAGATATATCAGAGCAACAATCATCATCCTTTACTCCATCATCCTGACTCACTGATAAGGCCTCATCAAAAATCATATCCTCAACAGCAGTCACCACCTTTACATCCTGACTCACTGGTAAGGCCTCATCAGGAACCACATCTTCAACAACTGTCACCACCTTTACATCCTGACTCACTGACAAGACCTCATCAGAAACCACATCTTTAGCAGCAGTCACTGCTTTTAAGCCTATTTTGCTACTATAACAAGGCTGCTCTTCTTGCAAAAAACCAGCAGATTCACTAGAAATTGCAC

Function

NR:

description
PREDICTED: exocyst complex component 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232195 True 538 lncRNA 0.38 1 688996 689533

Neighbor

gene id symbol gene type direction distance location
CI01000048_00659494_00667971 NA coding upstream 19517 659022 ~ 670072 (+)
CI01000048_00567988_00568484 NA coding upstream 119944 567988 ~ 569052 (+)
CI01000048_00425103_00519682 NA coding upstream 169106 425103 ~ 519890 (+)
CI01000048_00403297_00404487 NA coding upstream 284382 403232 ~ 404614 (+)
CI01000048_00261577_00264226 NA coding upstream 423454 261400 ~ 265542 (+)
CI01000048_00693752_00694265 NA coding downstream 3539 693072 ~ 694474 (+)
CI01000048_00705234_00707566 NA coding downstream 15328 704861 ~ 707608 (+)
CI01000048_00713811_00714700 NA coding downstream 23946 713479 ~ 714947 (+)
CI01000048_00809677_00812096 NA coding downstream 120144 809677 ~ 813160 (+)
CI01000048_01003499_01009234 NA coding downstream 313215 1002748 ~ 1010512 (+)
G204571 NA non-coding upstream 776 688018 ~ 688220 (+)
G204570 NA non-coding upstream 1269 684342 ~ 687727 (+)
G204569 NA non-coding upstream 5039 683694 ~ 683957 (+)
G204568 NA non-coding upstream 5662 682359 ~ 683334 (+)
G204567 NA non-coding upstream 11544 670679 ~ 677452 (+)
G204573 NA non-coding downstream 434 689967 ~ 690439 (+)
G204576 NA non-coding downstream 5401 694934 ~ 751948 (+)
G204592 NA non-coding downstream 34176 723709 ~ 887193 (+)
G204625 NA non-coding downstream 73496 763029 ~ 764695 (+)
G204472 NA other upstream 327335 361025 ~ 361661 (+)
G204409 NA other upstream 403249 285270 ~ 285747 (+)
G204233 NA other upstream 625399 63188 ~ 63597 (+)
G204824 NA other downstream 303922 993455 ~ 993969 (+)
CI01000048_01214358_01215546 NA other downstream 524839 1214358 ~ 1215807 (+)
G205026 NA other downstream 693422 1382955 ~ 1383698 (+)

Expression


Co-expression Network