CI01000051_07288569_07296096 (ELOVL1B)


Basic Information

Item Value
gene id CI01000051_07288569_07296096
gene name ELOVL1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7288085 ~ 7296096 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_07288569_07296096.mRNA
ATGCTGGAGATGGTGAAAGACAGAGTACTGGAGGTCTATGAAAGCCTCTTAGCAGGAAGAGACCCAAGGTTGAAGGATTACCTCCTAATGGAGAGTCCTGGCAGTATGACTGCTATTCTGCTTGCTTATCTTTTCTTTGTACTGTACGCCGGCCCTAAGTTTATGGCCAACCGCAAACCCTACCAGTTGAAAGAAGCTATGATCATTTACAACCTGTCCTTGGTTGTCCTCTCTGCATATATAGTATATGAGTTCTTGATGTCGGGGTGGGCGACAGGATACACGTGGAGGTGTGACCCATGTGATTATTCAAACAGCCCTCAAGGACTCAGAATGGCAAGAGTCTCCTGGTTATTTCTGTTTTCAAAGTTCATTGAGCTTATGGACACGGTGTTTTTTGTGCTGCGTAAGAAACACAGTCAGATCACCTTCCTGCACATCTTCCACCATTCCTTCATGCCCTGGACATGGTGGTGGGGCGTGAGCTATGCGCCAGGTGGAATGGGCTCCTTCCATGCCATGATCAACTCTTGTGTCCATGTGATCATGTACTCCTACTATGGCCTTTCTGCTGCCGGACCTCGCTTCCAGAAGTTCCTCTGGTGGAAGAAATACATGACTGCAATTCAGCTGATTCAGTTTGTGTTGGTGTCTCTTCATGTAACCCAGTGGTACTTCATGAAGAGCTGCGACTACCAGGTGCCTCTGTTCATTCACCTCATCTGGATGTACGGAACCTTCTTCTTCGTGCTGTTCTCTAACTTCTGGTACCAGGCGTACGTGAAGGGCAAGAGGCTACCGAAGAACACCCAACACCTCGCCCAGAATGGCAAGGCTAATGGATCAACCACAGTGGCCAACGGCTCGTCGGTTGTTTCAAACGGCCACGGTGTACATGAAAATGGCCAGAGCAACGGGAAGAAACACCATGAGAATGGAAGCACTCTCAACGGAAAGATGAAGAAAGCCTGAGAGCTCAGGAGAAGACGACCCAAAACGGATGACCAGGAGAACCTGCACTATGGCACTATGGAGTCCAAAGAGTGTTTTGGGACTTTTCATTTTCAAATCTTGAGTTCTTTTTAATGTGTACATTAAACAAGTACATGGGGATATGAATGCTTTTGACCCCGTTTGTATATTTTTTTTTTTTTTTGGTCATAAATTAATCTAAAAAATATAATTATTGAGCAAAATGTATGAAGAGAAGAGGAAGAGTACTGACTGGATGCATCCTCCGCTGATGTTGCTCATGAGGTTCATTTAAACCGAACAAATTCATGGATGGGCACAAACACACACACACACACACATACATCTGTGTGTCTTTCATACTCCCCCAATAGCAGACACTGTACAGTCAACATCAGTAAATTTGAATTACACCTGTAAATAGTTTCACCATATAAACTAACGGGATTGATACGGTAAAAAATATTGTTACTATTGAAATAAA

Function

symbol description
elovl1b Predicted to enable fatty acid elongase activity. Acts upstream of or within kidney development and swim bladder development. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane. Is expressed in several structures, including digestive system; fin; nervous system; periderm; and pleuroperitoneal region. Orthologous to human ELOVL1 (ELOVL fatty acid elongase 1).

GO:

id name namespace
GO:0006633 fatty acid biosynthetic process biological_process

KEGG:

id description
K10247 ELOVL1; elongation of very long chain fatty acids protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_07288569_07296096.mRNA True 1456 mRNA 0.44 7 7288085 7296096

Neighbor

gene id symbol gene type direction distance location
CI01000051_07218226_07226180 CHRNA4B coding downstream 61359 7218142 ~ 7226726 (-)
CI01000051_06966165_06969998 NA coding downstream 317868 6966093 ~ 6970217 (-)
CI01000051_06958650_06963551 CLEC11A coding downstream 324264 6958572 ~ 6963821 (-)
CI01000051_06910132_06916487 NA coding downstream 371598 6909440 ~ 6916487 (-)
CI01000051_06884323_06886377 EXOC8 coding downstream 401446 6884008 ~ 6886639 (-)
CI01000051_07403086_07404051 NA coding upstream 105971 7402067 ~ 7404784 (-)
CI01000051_07410144_07439528 MAST3, MAST3B coding upstream 113367 7409463 ~ 7439528 (-)
CI01000051_07580256_07582183 NA coding upstream 284145 7580241 ~ 7582183 (-)
CI01000051_07584669_07585335 NA coding upstream 288259 7584355 ~ 7585335 (-)
CI01000051_07618053_07621854 NA coding upstream 321946 7618042 ~ 7621854 (-)
G222295 NA non-coding downstream 115214 7162053 ~ 7172871 (-)
G222243 NA non-coding downstream 175188 7111614 ~ 7112897 (-)
G222195 NA non-coding downstream 236408 7016959 ~ 7051677 (-)
G222194 NA non-coding downstream 273774 7014105 ~ 7014311 (-)
G222190 NA non-coding downstream 276772 7011033 ~ 7011313 (-)
G222355 NA non-coding upstream 36202 7332298 ~ 7332515 (-)
G222356 NA non-coding upstream 46012 7342108 ~ 7342528 (-)
G222361 NA non-coding upstream 60007 7356103 ~ 7356312 (-)
G222363 NA non-coding upstream 61053 7357149 ~ 7357385 (-)
G222262 NA non-coding upstream 70796 7366892 ~ 7371000 (-)
G221840 NA other downstream 1154506 6132773 ~ 6133579 (-)
G221575 NA other downstream 1769261 5513952 ~ 5518824 (-)
G220041 NA other downstream 3129982 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 4326591 2955380 ~ 2961148 (-)
G218861 NA other downstream 4447453 2840270 ~ 2840632 (-)
G222729 NA other upstream 1046053 8342149 ~ 8342652 (-)
G222730 NA other upstream 1046874 8342970 ~ 8343438 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location