CI01000051_07580256_07582183


Basic Information

Item Value
gene id CI01000051_07580256_07582183
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7580241 ~ 7582183 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_07580256_07582183.mRNA
CAGCTTTTCTATTACAGCATTGCCTCAGGCAAGAAGGACGGAATGAGCCAGATGTTTAGCAGAGGACTTCGACTTGTTGTGGAGGTTCCACATGTCCATGTTGAGCGCCCGGTAACCCCGCAGGTGCATGTTCTAATTCCTGTTGGAGTTCAGAAGCAGCGCTCAGAGAGAGTGACACTTGCGTGTGTTATCACTGGGTTACAGTCTACAATGGTGAGGATCACATGGAAGGTGAATGGAGCAACAGGCCTCAAAAAATATGGCAGCTCTCCACAAGTGCAAAGAGAGCCTGGAGGTACATTCTCTGCTGTGGGACTGTACTCAGTTCTTGCTCATAAATGGAGTCGTGAGAATATGTACAGGTGTGAGGTGACATACAAAGGACCATTTTACTATGATAAGGTAGAGTCGTCTCTCTGCATTCCTCCTGAGGGACTGTAATTGTGTCCTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_07580256_07582183.mRNA True 456 mRNA 0.47 2 7580241 7582183

Neighbor

gene id symbol gene type direction distance location
CI01000051_07410144_07439528 MAST3, MAST3B coding downstream 140713 7409463 ~ 7439528 (-)
CI01000051_07403086_07404051 NA coding downstream 175457 7402067 ~ 7404784 (-)
CI01000051_07288569_07296096 ELOVL1B coding downstream 284145 7288085 ~ 7296096 (-)
CI01000051_07218226_07226180 CHRNA4B coding downstream 353515 7218142 ~ 7226726 (-)
CI01000051_06966165_06969998 NA coding downstream 610024 6966093 ~ 6970217 (-)
CI01000051_07584669_07585335 NA coding upstream 2172 7584355 ~ 7585335 (-)
CI01000051_07618053_07621854 NA coding upstream 35859 7618042 ~ 7621854 (-)
CI01000051_07836858_07853522 TMEM259 coding upstream 254642 7836825 ~ 7854111 (-)
CI01000051_08087374_08111384 NA coding upstream 504755 8086938 ~ 8111595 (-)
CI01000051_08247858_08254018 NA coding upstream 665460 8247643 ~ 8254266 (-)
G222383 NA non-coding downstream 74019 7468559 ~ 7506222 (-)
G222379 NA non-coding downstream 118451 7459102 ~ 7461790 (-)
G222378 NA non-coding downstream 121798 7458242 ~ 7458443 (-)
G222370 NA non-coding downstream 204251 7375718 ~ 7375990 (-)
G222262 NA non-coding downstream 209241 7366892 ~ 7371000 (-)
G222287 NA non-coding upstream 208195 7790378 ~ 7844010 (-)
G222289 NA non-coding upstream 237419 7819602 ~ 7867243 (-)
G222502 NA non-coding upstream 298457 7880640 ~ 7880840 (-)
G222519 NA non-coding upstream 376922 7959105 ~ 7959341 (-)
G222524 NA non-coding upstream 417259 7999442 ~ 7999673 (-)
G221840 NA other downstream 1446662 6132773 ~ 6133579 (-)
G221575 NA other downstream 2061417 5513952 ~ 5518824 (-)
G220041 NA other downstream 3422138 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 4618747 2955380 ~ 2961148 (-)
G218861 NA other downstream 4739609 2840270 ~ 2840632 (-)
G222729 NA other upstream 759966 8342149 ~ 8342652 (-)
G222730 NA other upstream 760787 8342970 ~ 8343438 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004030 si:ch211-1a19.2 coding NC_007122.7 CM002895.2 13605623 ~ 13611132 (-)