CI01000051_06910132_06916487


Basic Information

Item Value
gene id CI01000051_06910132_06916487
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6909440 ~ 6916487 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_06910132_06916487.mRNA
AGTTCATGCAAGAAACCTGTTGACAAATACATAGAATATGATCCAGTTATTATTCTGATAGATGCCACTCTATGCAAAACCCAGGCCTTTAGACATATACTCTTCAACACTGAGATCAATATCCACTGGAAACTGTGTGTGTTCTGTCTGCTGTGTGAGGCGTACCTACGCTGGTCCCTCCTGCAGGGGTCTCAGCCCAGCGATGACCCCGCTGACATCATCCGTTACACTAAAGAATGGGAGTTTTACTGCATGTTTGCACTGGCTGCACTGGAGTTGGCCGTGTTCTGCATAGGTGTGTTGGTCATTCTCTGGATGGCGCAACTCTTCTGTGGAGCTTCTTTAGAATTCACTCCGCTGTTGAAGGCTCTTCTGCTGTCCGGCTATGGCAAAGTGCTGTTAATTCCAGCTGTCATCTGGGAGCACGATTTCTCCCCGCTCTGCTTCAGCCTCATACGACTGTTTGTTTTGACCTCCAATTCACAAGCCATCAGAGATGTGGATGTAGGGGCATGCTTGTTATTACTTCAGAGATGTTGTTTGAGCAAGATGTTTTGTACAAAGGAATTTATTGTGAAACTAAATGAGGTCATAGAGAGCAAATTGTTCATCTTTACTATGGTTACCACATGGTTATGAGGTTTTCCATGCATATATGTCTGGTGTTTACTAAGCTAACCCCTTTTAAGACCAGTAACTTGTCTTCATTTGAGAATTCTCCTCATACACAGAAACTAGTTTGGGTCTATATAGGCAGAAAAAGAGCAGGCCTGCAGTTTTCACGGAATCCTGTATGTTTATAAAGACTTTGAAGGGACAGCTTCACATTCCTGAGGTCATTTGTCAAATTCCTCAATTAGCTCTGCTGAGAGAAGATGTTAACTCAAATATACTACAGATGGCTGTGGACCTGTGTCGACATGATGCGTTCAAATACTGTAATGATCTGAATGTCTGTTTTATATTGGCTGTTTTATGTATGGACTTGTGTAATTTATCTCTGTTACATAAATGTGAAGTGTGGACTTTCAGTATGAACTTGTGCAACTTGTTCTGAACAAACTCAGGGAATGATTCTTGCACTTCTTTGAACCCAGCTTTATGTTTTGTAACGGTTTAGTTTTTTTCTGAGGCAGTGCTGAGGGGGATTGTGGGTATTAAAGAGTAAGTTTTTAAAAAAATACAGTGTGTATTTGCTTCAAAATCGGTGCCCTAAAATAGTTTACAAGTTAGTTATTTTAGTATTATTAAATACTGTGTAAAAACACTAATTTTCTGGCAGCAGGGGAAAATGTCTCATTAAAAACAGAAAAATACTGTCAGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_06910132_06916487.mRNA True 1331 mRNA 0.40 4 6909440 6916487

Neighbor

gene id symbol gene type direction distance location
CI01000051_06884323_06886377 EXOC8 coding downstream 22801 6884008 ~ 6886639 (-)
CI01000051_06837978_06881158 TRIM67 coding downstream 27734 6837414 ~ 6881706 (-)
CI01000051_06803307_06824913 GNPAT coding downstream 84527 6803307 ~ 6824913 (-)
CI01000051_06739181_06742303 PLVAP, VSG1 coding downstream 167137 6738639 ~ 6742303 (-)
CI01000051_06423541_06426013 NA coding downstream 481827 6422096 ~ 6427613 (-)
CI01000051_06958650_06963551 CLEC11A coding upstream 42085 6958572 ~ 6963821 (-)
CI01000051_06966165_06969998 NA coding upstream 49606 6966093 ~ 6970217 (-)
CI01000051_07218226_07226180 CHRNA4B coding upstream 301655 7218142 ~ 7226726 (-)
CI01000051_07288569_07296096 ELOVL1B coding upstream 371598 7288085 ~ 7296096 (-)
CI01000051_07403086_07404051 NA coding upstream 485580 7402067 ~ 7404784 (-)
G222137 NA non-coding downstream 146020 6763190 ~ 6763420 (-)
G222054 NA non-coding downstream 219535 6663608 ~ 6689905 (-)
G221890 NA non-coding downstream 512453 6396781 ~ 6396987 (-)
G221858 NA non-coding downstream 714545 6194660 ~ 6194895 (-)
G222173 NA non-coding upstream 56595 6973082 ~ 6994996 (-)
G222190 NA non-coding upstream 94546 7011033 ~ 7011313 (-)
G222194 NA non-coding upstream 97618 7014105 ~ 7014311 (-)
G222195 NA non-coding upstream 100472 7016959 ~ 7051677 (-)
G222243 NA non-coding upstream 195127 7111614 ~ 7112897 (-)
G221840 NA other downstream 775861 6132773 ~ 6133579 (-)
G221575 NA other downstream 1390616 5513952 ~ 5518824 (-)
G220041 NA other downstream 2751337 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 3947946 2955380 ~ 2961148 (-)
G218861 NA other downstream 4068808 2840270 ~ 2840632 (-)
G222729 NA other upstream 1425662 8342149 ~ 8342652 (-)
G222730 NA other upstream 1426483 8342970 ~ 8343438 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017102 arv1 coding NC_007131.7 CM002904.2 3997684 ~ 4011994 (+)