G217647


Basic Information

Item Value
gene id G217647
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 713773 ~ 714585 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU246902
CAGGGTTGCCAGGTTCACAACAAAGCCCAACCAAATTGCTACTCAAAACTAGCCCAGGGGGTTAAATCGCATTCCAGGGGCTAAATGATGCGCATTGAGGAATTTATTTGGTAAATGTGTTCACATTGTAGTTTATGCGCATGTTTTCTTATTGGATAAAAAATGTATCAGACTCAAACGAGCGCATGTGTTTTTTTATGCACATTTTTAGAATTTATGCACATTTTGGCGCTTCCATCTAGCAGTTTTTGATGCGATATCCCAAAATGCGTGGATGTACACGAACCCTTACTGAACAAATATGCCCCCTTACTAAGCTTCAAGTGTGAATGAGACTTGGAACGACACTGAACAAGACACTGAATTCAAGACATCTACTTCAAGACATCTTATGATGCTTAAAAAACCTTTTAAAAAGTCTCTTAATAGATTAGACATTAGTTATGAATGGATTAATGTTTTTAACAAATAAGTTGAGTGAATAATTCAGTGTCTCCTAACAATTATTTAATGATTCATAACATTTAAAGTTAATTGCCACCATCTACTGGCGTAATGATGTAATCGGCAGAAAGGGCCACTGAACAAATCAGTGAACAAACCATTCTAGTGAACAGATGTGACGTCTGAGGCCGAGACTGCTGAGCTCTAAGCATGTGTGGGCTTGTTAGTGTATATTATATATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246902 True 687 lncRNA 0.37 2 713773 714585

Neighbor

gene id symbol gene type direction distance location
CI01000051_00609069_00611567 NA coding downstream 102206 608741 ~ 611567 (-)
CI01000051_00568303_00576339 NA coding downstream 137434 567867 ~ 576339 (-)
CI01000051_00560810_00563417 NA coding downstream 150356 560768 ~ 563417 (-)
CI01000051_00520062_00525658 IF5, EIF5 coding downstream 188115 519810 ~ 525658 (-)
CI01000051_00505008_00505358 FAM167AB coding downstream 208305 505008 ~ 505468 (-)
CI01000051_00761469_00766842 NA coding upstream 46868 761453 ~ 766842 (-)
CI01000051_00787723_00808318 NA coding upstream 73138 787723 ~ 809024 (-)
CI01000051_00809947_00817933 KCTD1 coding upstream 95362 809947 ~ 817933 (-)
CI01000051_00824615_00825825 KCTD1 coding upstream 110030 824615 ~ 826076 (-)
CI01000051_00846746_00856041 AQP4 coding upstream 131917 846502 ~ 856041 (-)
G217513 NA non-coding downstream 25246 683662 ~ 688527 (-)
G217607 NA non-coding downstream 126401 586863 ~ 587372 (-)
G217606 NA non-coding downstream 128318 585219 ~ 585455 (-)
G217599 NA non-coding downstream 181304 532165 ~ 532469 (-)
G217597 NA non-coding downstream 183989 529584 ~ 529784 (-)
G217660 NA non-coding upstream 50994 765579 ~ 765938 (-)
G217688 NA non-coding upstream 155752 870337 ~ 871281 (-)
G217698 NA non-coding upstream 176361 890946 ~ 891323 (-)
G217731 NA non-coding upstream 228929 943514 ~ 974530 (-)
CI01000051_01015039_01066156 CDH2 non-coding upstream 342943 1014806 ~ 1066317 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 307978 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 431144 278192 ~ 304373 (-)
CI01000051_00224709_00227613 NA other downstream 470747 224507 ~ 227613 (-)
CI01000051_01785489_01787612 IGFBP1A other upstream 994713 1784416 ~ 1787760 (-)
G218728 NA other upstream 1812758 2527343 ~ 2546459 (-)
G218861 NA other upstream 2125685 2840270 ~ 2840632 (-)
CI01000051_02955633_02960400 SCRN2 other upstream 2245003 2955380 ~ 2961148 (-)
G220041 NA other upstream 3441145 4155730 ~ 4158103 (-)

Expression


Co-expression Network