CI01000051_00609069_00611567


Basic Information

Item Value
gene id CI01000051_00609069_00611567
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 608741 ~ 611567 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_00609069_00611567.mRNA
ATCTTCCCAGACTCCCATGAAAGGTTCCCTAAGCTTTCCAAACGCTTGCCGTCGATCGTGGTGGAGCCCACTGAGAGCGGGGAGGTAGAGAGCGGGGAACTGCGCTGGCCTCCTGATGATCTGAGCCCTACAGACGACCCCAGAGACAAACAGGCCCAGGCTGCATCATCAGATGCGAATGCATTTGCAGGGATGTTTGAATATATGTATGTATTTCAGGTGACAAGCTCACAGAAGACAGCCAAGAGGTCGAAACGGGGACGGAAATCTAAGAGGCGATGGTTGGCACTAATCCAGCCAATCACTGTGAATGTCTTCATTACGGACAGGAGTGAATGGGAGACTCCACCAGTTAGGTCTGCCTATCATCCACACTAGAGCCGCCCACCTGTTGACCTCCACTCCCCTAGGTGGAGCCGAGGCCTGAGAGACTGTCTTCACTGAACTAGCTCATGTGCCAAACTCTAGTGGTAGTCAGCTGCTGTGAGTTTTAAATTATCTCCAATAACACCACGATACCCATTAGAAGTCACCTACTCTGTATGCCTGCTAAATTATAGATTGGCATTCACTTATGTATTGATTTGCTTTGGACCAAAGTCTTTCATTCCTTCATATCAAAAGGATCTTAATTTGTTGTAGAATATCAGCATACTTTAAGTGAAAATGGATTTCAGATAACTAGAGTGCATAATGAAACATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_00609069_00611567.mRNA True 706 mRNA 0.46 2 608741 611567

Neighbor

gene id symbol gene type direction distance location
CI01000051_00568303_00576339 NA coding downstream 32402 567867 ~ 576339 (-)
CI01000051_00560810_00563417 NA coding downstream 45324 560768 ~ 563417 (-)
CI01000051_00520062_00525658 IF5, EIF5 coding downstream 83083 519810 ~ 525658 (-)
CI01000051_00505008_00505358 FAM167AB coding downstream 103273 505008 ~ 505468 (-)
CI01000051_00478608_00478959 NA coding downstream 129782 475707 ~ 482200 (-)
CI01000051_00761469_00766842 NA coding upstream 149886 761453 ~ 766842 (-)
CI01000051_00787723_00808318 NA coding upstream 176156 787723 ~ 809024 (-)
CI01000051_00809947_00817933 KCTD1 coding upstream 198380 809947 ~ 817933 (-)
CI01000051_00824615_00825825 KCTD1 coding upstream 213048 824615 ~ 826076 (-)
CI01000051_00846746_00856041 AQP4 coding upstream 234935 846502 ~ 856041 (-)
G217607 NA non-coding downstream 21369 586863 ~ 587372 (-)
G217606 NA non-coding downstream 23286 585219 ~ 585455 (-)
G217599 NA non-coding downstream 76272 532165 ~ 532469 (-)
G217597 NA non-coding downstream 78957 529584 ~ 529784 (-)
G217513 NA non-coding upstream 72095 683662 ~ 688527 (-)
G217647 NA non-coding upstream 102206 713773 ~ 714585 (-)
G217660 NA non-coding upstream 154012 765579 ~ 765938 (-)
G217688 NA non-coding upstream 258770 870337 ~ 871281 (-)
G217698 NA non-coding upstream 279379 890946 ~ 891323 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 202946 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 326112 278192 ~ 304373 (-)
CI01000051_00224709_00227613 NA other downstream 365715 224507 ~ 227613 (-)
CI01000051_01785489_01787612 IGFBP1A other upstream 1097731 1784416 ~ 1787760 (-)
G218728 NA other upstream 1915776 2527343 ~ 2546459 (-)
G218861 NA other upstream 2228703 2840270 ~ 2840632 (-)
CI01000051_02955633_02960400 SCRN2 other upstream 2348021 2955380 ~ 2961148 (-)
G220041 NA other upstream 3544163 4155730 ~ 4158103 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017242 si:dkeyp-72h1.1 coding NC_007131.7 CM002904.2 18551657 ~ 18595559 (+)