Gene
RNA
| Item | Value |
|---|---|
| gene id | G217688 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 870337 ~ 871281 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246956 | True | 207 | lncRNA | 0.29 | 3 | 870337 | 871281 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_00846746_00856041 | AQP4 | coding | downstream | 14296 | 846502 ~ 856041 (-) |
| CI01000051_00824615_00825825 | KCTD1 | coding | downstream | 44261 | 824615 ~ 826076 (-) |
| CI01000051_00809947_00817933 | KCTD1 | coding | downstream | 52404 | 809947 ~ 817933 (-) |
| CI01000051_00787723_00808318 | NA | coding | downstream | 61313 | 787723 ~ 809024 (-) |
| CI01000051_00761469_00766842 | NA | coding | downstream | 103495 | 761453 ~ 766842 (-) |
| CI01000051_01015039_01066156 | CDH2 | coding | upstream | 143525 | 1014806 ~ 1066317 (-) |
| CI01000051_01371462_01386606 | NA | coding | upstream | 500181 | 1371462 ~ 1386606 (-) |
| CI01000051_01468663_01486168 | B4GALT5, B4GALT6 | coding | upstream | 597138 | 1468419 ~ 1487172 (-) |
| CI01000051_01511542_01512516 | NA | coding | upstream | 639862 | 1511143 ~ 1512554 (-) |
| CI01000051_01528013_01535266 | OPN7A | coding | upstream | 656628 | 1527909 ~ 1535266 (-) |
| G217660 | NA | non-coding | downstream | 104399 | 765579 ~ 765938 (-) |
| G217647 | NA | non-coding | downstream | 155752 | 713773 ~ 714585 (-) |
| G217513 | NA | non-coding | downstream | 181810 | 683662 ~ 688527 (-) |
| G217607 | NA | non-coding | downstream | 282965 | 586863 ~ 587372 (-) |
| G217606 | NA | non-coding | downstream | 284882 | 585219 ~ 585455 (-) |
| G217698 | NA | non-coding | upstream | 19665 | 890946 ~ 891323 (-) |
| G217731 | NA | non-coding | upstream | 72233 | 943514 ~ 974530 (-) |
| G217779 | NA | non-coding | upstream | 267201 | 1138482 ~ 1138785 (-) |
| G217783 | NA | non-coding | upstream | 278960 | 1150241 ~ 1150465 (-) |
| CI01000051_00560810_00563417 | NA | other | downstream | 303182 | 560768 ~ 563417 (-) |
| CI01000051_00394082_00407612 | MTMR9 | other | downstream | 464542 | 392720 ~ 407612 (-) |
| CI01000051_00278614_00302552 | NA | other | downstream | 587708 | 278192 ~ 304373 (-) |
| CI01000051_00224709_00227613 | NA | other | downstream | 627311 | 224507 ~ 227613 (-) |
| CI01000051_01785489_01787612 | IGFBP1A | other | upstream | 838017 | 1784416 ~ 1787760 (-) |
| G218728 | NA | other | upstream | 1656062 | 2527343 ~ 2546459 (-) |
| G218861 | NA | other | upstream | 1968989 | 2840270 ~ 2840632 (-) |
| CI01000051_02955633_02960400 | SCRN2 | other | upstream | 2088307 | 2955380 ~ 2961148 (-) |
| G220041 | NA | other | upstream | 3284449 | 4155730 ~ 4158103 (-) |
