G223618


Basic Information

Item Value
gene id G223618
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 1616564 ~ 1617578 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU253651
GGGTGGTAGCAATACTTTGAGTATGCAACATTTCTTTGGACTCTTCAACGGATGAGATATGGTGCCTTTAAATTCAGCAAAGTATAACAAATAATAATAAATCCAAAATGTAAAAATATGCAATCTACTCCAATTTCTCGTAACACTGCAAACCCCTGTGAAGTTTGTATTCTTTTAATTCATCTAAATCTTGGTTTATACTCGCCATATACTCGCCGTGCGCACGGCAAAAATGACATTGTCGCGGTTGTGCGCGTTGAGTTGAGTTTTTGGTTCTTTTGTAGCATGGGTTTGGTAAAGTGTAATAAAAAAACAGACATCGTCACGTGTGTACCTTACTACTTCTCACCGCTACTTCCTGCTTAGAGAACAATTACTCCGGTCGTTTCAAAGAATAGTACAACGGCAAGTATAAGTCAATAGTACGAGTCAAGTATAAACGCCTTGTCCATTTGCGGAGGAGCGCAAGCAGTCAGCGGAGGCTTGCGGTGCGGAGCCAGGTGAAAGTATAATCAAGGCTTAAGAGGTCACAATTTGATCCTGGTCTTTTGATGCCTTCAACATCCTGTTCTCATAGTAATAATAAGTTTGATTATAGTTCAACCACTCTAAATTGTGTAGCTAAATTATGTGTAGCTATATCAGATTCAGATCTTTATCAGTTTAACCCATTGACCTCAGTAACAACAATACTAACGTAAAATAAAATGAAACCCAATAATTGTATGCTGAAAGTAACACACATTTATAACACACCCACCTATATTCATTGACTCATAGATGCATACACATGCTACTACACACACTCAAGCACAACCATCAGCAGTGCATTGATTTTTCTCCTTAGTGCCAATTAAGACCCTCCTTATCCATCAGTAATTACCCTGACCTTTACAAACTACTCTTTCATCCCTTATAGACTGACAGATTCCTCCTCCAGACCATCAAAAGCATAAAAATCTTGCATTCTCTCCTCTCTGATCAGAGGCTAAGAGCTTCTCGATTTACCCTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253651 True 1015 lncRNA 0.39 1 1616564 1617578

Neighbor

gene id symbol gene type direction distance location
CI01000052_01605314_01607566 NA coding upstream 8656 1603790 ~ 1607908 (+)
CI01000052_01550561_01556654 STK38, STK38A coding upstream 59554 1550561 ~ 1557010 (+)
CI01000052_01509450_01515974 SEMA3GA coding upstream 100272 1509450 ~ 1516292 (+)
CI01000052_01481868_01485237 TSPY coding upstream 129715 1481868 ~ 1486849 (+)
CI01000052_01468551_01480835 FOXP3A coding upstream 135582 1468551 ~ 1480982 (+)
CI01000052_01646159_01681413 NA coding downstream 27558 1645136 ~ 1681417 (+)
CI01000052_01698030_01702872 ATP5F1 coding downstream 79812 1697390 ~ 1703488 (+)
CI01000052_01709380_01717983 EPS8L3B coding downstream 91802 1709380 ~ 1718038 (+)
CI01000052_01775176_01778348 GNAT2.S, GNAT2 coding downstream 157598 1775176 ~ 1778576 (+)
CI01000052_01842187_01843668 AMIGO1 coding downstream 223751 1841329 ~ 1844325 (+)
G223616 NA non-coding upstream 7148 1609138 ~ 1609416 (+)
G223605 NA non-coding upstream 87092 1529242 ~ 1529472 (+)
G223602 NA non-coding upstream 105423 1510911 ~ 1511141 (+)
G223597 NA non-coding upstream 120617 1495737 ~ 1495947 (+)
G223444 NA non-coding upstream 254764 1360093 ~ 1361800 (+)
G223620 NA non-coding downstream 23865 1641443 ~ 1642116 (+)
G223629 NA non-coding downstream 90066 1707644 ~ 1708298 (+)
G223630 NA non-coding downstream 95494 1713072 ~ 1713373 (+)
G223635 NA non-coding downstream 120656 1738234 ~ 1738470 (+)
G223643 NA non-coding downstream 151963 1769541 ~ 1769859 (+)
G223545 NA other upstream 345637 1270492 ~ 1270927 (+)
G223694 NA other downstream 431748 2049326 ~ 2104299 (+)
G224953 NA other downstream 1813558 3431136 ~ 3460136 (+)

Expression


Co-expression Network