XLOC_009841 (ankrd28b)


Basic Information

Item Value
gene id XLOC_009841
gene name ankrd28b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 20055878 ~ 20154859 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019647
TGGAGTTTTCTCCCCTGCTCATCAGTGGCAAATAGGAGACCCAGGCCTACTGGATACGCTAGTTTTACCGGCTCTTAAAAATCAGCATTCAAGTGGTGGTGGTGAATACATTACGTTTAGTCCTGCATGAGAGCCAACGAGCGCATCGAAACATGGTGGTTCTCAAAATCAGAGACCAGCCTGCCCTACTAAAAGCTATTTTTAATGTGGATCCGGATGAAGTACGCTCCCTCATTTTCAAGAAAGAGGATGTGAATGTACAAGACAATGAGAAAAGGACACCGCTGCATGCAGCTGCTTACCTTGGAGATGCTGAGATTATAGAGCTTTTAATTTTATCAGGGGCGAGGGTGAATGCCAAAGACAACAAATGGCTAACTCCTCTGCACCGCGCCGTGGCGTCCTGCAGTGAGGAGGCGGTGCAGGTTTTGTTGAAGCACTCTGCTGATGTGAATGCTCGAGATAAGAACTGGCAGACTCCTCTACATGTGGCGGCTGCTAACAAGGCGGTTCGCTGTGCTGAGGCGCTGGTGCCACTGCTCAGCAATGTTAATGTATCAGATCGTGCTGGACGCACAGCTCTGCACCACGCTGCCTTTAGCGGCCACCTGGAGATGGTGAGGTTACTGCTATCCAGGGGAGCAAACATTAATGCGTTTGATAAGAAGGACCGAAGGGCGATCCATTGGGCGGCATACATGGGTCACATGGAGGTGGTGAAACTGCTGGTGTCTCATGGTGCTGAAGTGCCGTGCAAGGATAAGAAAGCTTACACACCTCTCCACGCTGCAGCCTCCAGCGGGATGATCAGTGTAGTGAAGTATCTGCTCGACATGGGAGTCGATATGAATGAGCCAAACGCGTATGGAAACACACCGCTGCACGTGGCTTGCTACAATGGTCAGGATGTGGTGGTGAACGAGTTGATCGAGTGTGGCGCCAATGTGAACCAGGTTAATGAGAAGGGCTTCGCACCCCTGCACTTCACCGCCGCCTCACGACATGGAGCACTTTGCCTTGAGCTGCTTGTGGGCAATGGTGCAGATGTCAATATCAAGAGTAAGGATGGTAAAACTCCCCTACATATGACTGCAATCCACGGGAGGTTCTCAAGATCTCAGGCCATTATTCAAAACGGTGCTGAGATAGACTGTGAAGATAAGAATGGGAACACTCCTCTGCACATCGCAGCCCGATACGGACATGAGCTTCTCATCAACACACTGATCACAAATGGAGCTGATACGGCCAAgagAGGAGTTCATGGCATGTTTCCACTGCATTTGGCTGCTCTCAGCGGCTTCTCGGACTGCTGCCGTAAGCTGCTGTCTTCTGGCTTTGATATAGACACCCCTGATGACTTTGGAAGGACCTGTTTACATGCTGCTGCTGCCGGCGGGAACCTTGAATGTTTGAATCTTCTCCTCAACACGGGGGCAGATTTCAACAGGAAGGACAGCTTTGGAAGGACACCTTTGCACTACGCAGCTGCAAACTGCAACTACCAGTGCCTGTTTGCTTTGGTGGGCTCAGGAGCCAACGTCAATGAGCTTGACAAGAGGGGCTGCACCCCCCTCCATTATGCCGCTGCTTCTGACGCCGATGGAAAGTGCCTGGAATATTTGCTGAGGAATGATGCTAACCCAGGGATCCGAGACAATCAGGGCTACAATGCAGTGCATTACGCCTCTGCGTATGGACACCGTCTGTGTCTGGAGTTgATTGCGAGTGAAACTCCGTTAGATGTGTTAATGGAAACCTCAGGGACAGACATCCTAAATGACTCTGATGTACTTGCTCCTGTGAGCCCTCTACATCTGGCTGCATATCATGGACATCACCAGGCTCTCGAGGTACTGGTTCAGTCTCTGCTGGATCTGGATGTGAGAACTGCACAAGGACACACACCGCTGGATCTGGCCGCCTTCAAAGGTCACGTTGAATGTGTGGATGTGCTCATCAATCAAGGGGCCTCCATCCTAGTGAAGGACTATACGCTCAAACGCACCCCTATCCATGCTGCCGCCACAAATGGTCATTCTGAATGTCTCCGTTTGCTCATTGGAAATGCTGATCTGCAGAGTGCAGTGGACATCCAGGATGGGATTGGCCAGACTCCTCTGATGCTGTCAGTGCTCGGCGGACACACAGACTGCGTTTATTCTCTTATTAATAAAGGAGCCAATGTTGATGCCAAAGACAAGTGGGGCCGCACTGCTCTACACAGAGGGGCGGTGACGGGCCACGAGGAGTGTGTGGAGGCTCTGCTGCAGCACAGTGCCAGTTTCATGGTACGGGACTGTAGAGGCCGCTCTCCCGTTCACCTTGCGTCGGCCTGTGGGCACGTTGGGGTTCTGGGGGGCCTTCTGCATGCTGCCCAGTCAGTAGAGAGCATTCCTGTCATCACTGACCACCAGGGCTACACGCCGCTGCACTGGGCCTGTTACAACGGTCATGACACTTGTGTTGAGGTGTTGCTGGAGCAGGAGTTGTTTCATAAGACTGAAGGGAACCCGTTTAGCCCCCTTCACTGTGCTGTaatAAATGACAATGAAGGAGCAGTCGAGCTGTTGATAGAAACACTTAGTCCTGTCATCGTCAATGCAAATGATTCCAAAAACAGGACTCCTCTTCACGCTGCTGCATTCACCGATCATGTGGAGTGCCTGCAGCTCCTGCTGGGCCACAATGCACAGGTGAACTGTGTGGATGCTGGAGGAAAAACCCCGCTCATGATGGCCGCTGAGAACGGCCAGACTAATGCAGTTGAGGTGTTGGTGAGCAGTGCTAAAGCAGATCTCACGCTACAGGACGCCAACAAAAACACTGCTCTCCATCTGGCCTGCAGTAAGGGTCATGAAACCAGTGCCTTGTTGATCTTGGAGAAGATCACCGACAGAAACCTCATCAATTCCACTAACGCAGCTTTACAAACGCCCTTGCATGTGGCTGCCAGGAATGGCTTGACTGTGGTTGTCCAAGAACTGCTTGCTAAGGGTGCTAGTGTGCTTGCCGTGGATGAAAATGGCTACACTCCGGCCCTGGCTTGCGCTCCTAACAAAGATGTGGCCGATTGCCTGGCGCTCATCCTGGCCACCATGATGCCAGTTTCTCCTGGCGGAGGCTCGGTGCCCACGCTCACATTCAGTGCCATCAACCACTACACCAGCCCCACTAAAAGCGTCACCTTCGACAGCCTACCAATGCTCCGCTCCGAACACAGCTCCTACTGCAGCTTTAACAGCATTGGCCGCCACGACGGCTTCTACAAGGACGAGGAGCTCAACGACTCCGACTCAGAGACTTACTGAGGTAAACAAAAGCAGAGGCGCACATCTTGTCTTAATTACCCAGCGGCCGGCCACTCCGCAGAGCCTTAAGAGTctctacacatacacacacacatacacgtggcGCAGCAGGCTGGCCTTCCTCATCCATCAGCTCAACCTCTGCCAATGCATCTTGCCCTATGTAAATTTTAGGAATAGGTGGACGGACCTCCAGATGTGGCAATAACAAGACAAGGAATCAGCAGCCTGGGGACCAATATTTTTGCACAGGATGGTTTGACACTGTCGTATTGCAAACACGGATTCATATAT
>TCONS_00019648
ATGGTGGTTCTCAAAATCAGAGACCAGCCTGCCCTACTAAAAGCTATTTTTAATGTGGATCCGGATGAAGTACGCTCCCTCATTTTCAAGAAAGAGGATGTGAATGTACAAGACAATGAGAAAAGGACACCGCTGCATGCAGCTGCTTACCTTGGAGATGCTGAGATTATAGAGCTTTTAATTTTATCAGGGGCGAGGGTGAATGCCAAAGACAACAAATGGCTAACTCCTCTGCACCGCGCCGTGGCGTCCTGCAGTGAGGAGGCGGTGCAGGTTTTGTTGAAGCACTCTGCTGATGTGAATGCTCGAGATAAGAACTGGCAGACTCCTCTACATGTGGCGGCTGCTAACAAGGCGGTTCGCTGTGCTGAGGCGCTGGTGCCACTGCTCAGCAATGTTAATGTATCAGATCGTGCTGGACGCACAGCTCTGCACCACGCTGCCTTTAGCGGCCACCTGGAGATGGTGAGGTTACTGCTATCCAGGGGAGCAAACATTAATGCGTTTGATAAGAAGGACCGAAGGGCGATCCATTGGGCGGCATACATGGGTCACATGGAGGTGGTGAAACTGCTGGTGTCTCATGGTGCTGAAGTGCCGTGCAAGGATAAGAAAGCTTACACACCTCTCCACGCTGCAGCCTCCAGCGGGATGATCAGTGTAGTGAAGTATCTGCTCGACATGGGAGTCGATATGAATGAGCCAAACGCGTATGGAAACACACCGCTGCACGTGGCTTGCTACAATGGTCAGGATGTGGTGGTGAACGAGTTGATCGAGTGTGGCGCCAATGTGAACCAGGTTAATGAGAAGGGCTTCGCACCCCTGCACTTCACCGCCGCCTCACGACATGGAGCACTTTGCCTTGAGCTGCTTGTGGGCAATGGTGCAGATGTCAATATCAAGAGTAAGGATGGTAAAACTCCCCTACATATGACTGCAATCCACGGGAGGTTCTCAAGATCTCAGGCCATTATTCAAAACGGTGCTGAGATAGACTGTGAAGATAAGAATGGGAACACTCCTCTGCACATCGCAGCCCGATACGGACATGAGCTTCTCATCAACACACTGATCACAAATGGAGCTGATACGGCCAAgagAGGAGTTCATGGCATGTTTCCACTGCATTTGGCTGCTCTCAGCGGCTTCTCGGACTGCTGCCGTAAGCTGCTGTCTTCTGGCTTTGATATAGACACCCCTGATGACTTTGGAAGGACCTGTTTACATGCTGCTGCTGCCGGCGGGAACCTTGAATGTTTGAATCTTCTCCTCAACACGGGGGCAGATTTCAACAGGAAGGACAGCTTTGGAAGGACACCTTTGCACTACGCAGCTGCAAACTGCAACTACCAGTGCCTGTTTGCTTTGGTGGGCTCAGGAGCCAACGTCAATGAGCTTGACAAGAGGGGCTGCACCCCCCTCCATTATGCCGCTGCTTCTGACGCCGATGGAAAGTGCCTGGAATATTTGCTGAGGAATGATGCTAACCCAGGGATCCGAGACAATCAGGGCTACAATGCAGTGCATTACGCCTCTGCGTATGGACACCGTCTGTGTCTGGAGTTgATTGCGAGTGAAACTCCGTTAGATGTGTTAATGGAAACCTCAGGGACAGACATCCTAAATGACTCTGATGTACTTGCTCCTGTGAGCCCTCTACATCTGGCTGCATATCATGGACATCACCAGGCTCTCGAGGTACTGGTTCAGTCTCTGCTGGATCTGGATGTGAGAACTGCACAAGGACACACACCGCTGGATCTGGCCGCCTTCAAAGGTCACGTTGAATGTGTGGATGTGCTCATCAATCAAGGGGCCTCCATCCTAGTGAAGGACTATACGCTCAAACGCACCCCTATCCATGCTGCCGCCACAAATGGTCATTCTGAATGTCTCCGTTTGCTCATTGGAAATGCTGATCTGCAGAGTGCAGTGGACATCCAGGATGGGATTGGCCAGACTCCTCTGATGCTGTCAGTGCTCGGCGGACACACAGACTGCGTTTATTCTCTTATTAATAAAGGAGCCAATGTTGATGCCAAAGACAAGTGGGGCCGCACTGCTCTACACAGAGGGGCGGTGACGGGCCACGAGGAGTGTGTGGAGGCTCTGCTGCAGCACAGTGCCAGTTTCATGGTACGGGACTGTAGAGGCCGCTCTCCCGTTCACCTTGCGTCGGCCTGTGGGCACGTTGGGGTTCTGGGGGGCCTTCTGCATGCTGCCCAGTCAGTAGAGAGCATTCCTGTCATCACTGACCACCAGGGCTACACGCCGCTGCACTGGGCCTGTTACAACGGTCATGACACTTGTGTTGAGGTGTTGCTGGAGCAGGAGTTGTTTCATAAGACTGAAGGGAACCCGTTTAGCCCCCTTCACTGTGCTGTaatAAATGACAATGAAGGAGCAGTCGAGCTGTTGATAGAAACACTTAGTCCTGTCATCGTCAATGCAAATGATTCCAAAAACAGGACTCCTCTTCACGCTGCTGCATTCACCGATCATGTGGAGTGCCTGCAGCTCCTGCTGGGCCACAATGCACAGGTGAACTGTGTGGATGCTGGAGGAAAAACCCCGCTCATGATGGCCGCTGAGAACGGCCAGACTAATGCAGTTGAGGTGTTGGTGAGCAGTGCTAAAGCAGATCTCACGCTACAGGACGCCAACAAAAACACTGCTCTCCATCTGGCCTGCAGTAAGGGTCATGAAACCAGTGCCTTGTTGATCTTGGAGAAGATCACCGACAGAAACCTCATCAATTCCACTAACGCAGCTTTACAAACGCCCTTGCATGTGGCTGCCAGGAATGGCTTGACTGTGGTTGTCCAAGAACTGCTTGCTAAGGGTGCTAGTGTGCTTGCCGTGGATGAAAATGGCTACACTCCGGCCCTGGCTTGCGCTCCTAACAAAGATGTGGCCGATTGCCTGGCGCTCATCCTGGCCACCATGATGCCAGTTTCTCCTGGCGGAGGCTCGGTGCCCACGCTCACATTCAGTGCCATCAACCACTACACCAGCCCCACTAAAAGCGTCACCTTCGACAGCCTACCAATGCTCCGCTCCGAACACAGCTCCTACTGCAGCTTTAACAGCATTGGCCGCCACGACGGCTTCTACAAGGACGAGGAGCTCAACGACTCCGACTCAGAGACTTACTGAGGAATAGGTGGACGGACCTCCAGATGTGGCAATAACAAGACAAGGAATCAGCAGCCTGGGGACCAATATTTTTGCACAGGATGGTTTGACACTGTCGTATTGCAAACACGGATTCATATATAATTTTTCAGATCTTGAGGGATAATTTAAATCAGtcgctttaaaaaaacaaaacaaaacataactgggACATTTGTGTGCTTTCAAACAGTTTTCAGTCGGTGTGCACTTCTGATCAACTATTGGGGGAaagaaatgatttattttttaaacaaacgtGATTTTAATACCTGTCTCTGACCCTCTCGAAGGGGGAAAACAAATCGAGTAGTTTCTAAAGCGCAAAGGTGAAATTTGAGGATATGAACATCAGCGTTGTGTAATGCTTTCGGCCACAAGCAtgagtttaaaacaaaacaaaaaaaacagctaaCACCTCTCTCCATCTTCAGTTTTAGGATAAATTATTCTTTTTATCTatggtatttatttttactttccgCATTTCATCATCATTTTGTGCCTTCATAAATTACTGTATGGAGGGAAGGGGCAGCTCGAGAGAACAAATTCTACAATGCACAAGAAGTTCAACACTACATCTGTGAAAAAAGCACTGAAAATGAAAGGCAAACGGCTCCCAGCATGCTTTGCTCCAGGATGAGGAACACTGTGTAAAAACCAATGGTAGAACAGCATTTGATCTCTTTGTATGttgatatatgaatataaatatatattatattttttctggcTCTTATTAACATGACGTTTTTTGAGCAGGTTTGCTCGCTTTGAATTAGCAAATGAAACCACTCGATACTTCTGTGATGGCCTGTCAGAAAAAAACCCCTGTGTTTGTCTCTTTTCATGCTTTTGAGTTTTGGAATGATTGAAACTGGAAACCTGTTCAGTACAGCTTCCCGTCTGAGAGGGGGGCAGCAGAAATCTGTTTGCATCGCTCTTCTTTTATTACCAGTCTTTTTTTGTGGAAATAAAGGAGAGTGATTGGTGCAGTTGATGGCCACTGCTGTCCTTCTATTCGGAACAAGAGATTCCTGTATATTTTAtggttgattaaataaataaatgagttcaGTAATTtgaaattgttgttgttgtcaagtCCTTAAGAAAACGGTACAGAACAAAAATGAAATAACccgtggtggaaagagtactgaaaaatcatactcaagtaaaagtaccattatttgCCTAAAATGtcgtgcaagtagagtaaaatcaTCTGTTGTATAATTACTCAGattatgagtaaaaagtagacttttcaaaagcactcaagagtagtgagtattatgctgtaaaaagctgatgtgtttacatgcaagttgtacgtgtgtgtgtctgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaatgtaacattctttaGTGCATCGAGTtcttgcccagcaggcacacaacatcataagtcattaatattaggtaagattccagttgtgatgtcaggtggccaaaattcaatgtctagtcagcgtctaaagacgtaattttgatgtctaataatgacgtcaaatgacgttgatatttggtcgatttttaGATTGTTAGAAAGTGGCCATAATCTACCGtcaagtcaacatcttaaaccaacgtcatattgacgacaaatactgacatttattcgtcaggtatggcaactaaaatccaacatctgatagacgtcatagtaataacgtccacacaacattaagctgtaacatcattagacattgatatttggtttgtTTTGGGTTGGGcattgatgttggcctgacgttcagttctgacgtcaaccttatttttatttctaaacaaaatgcaatgtccatgacattagggtacaacgtcaatctgatatgttgacatcttgtgcctgctggttgtttaaggccatttcggtcatcatacagtaagcatctgtcatcttctcatcagtggcatgcatttaaacagtctctgggtgaATGCatttaaagattttggacatcattttgaacacttttaatgcttccaaacagtttgctggaCGTCTTGAGGTCATTCATTATGATGCCATTTACCCTCTGTGTGCTATTTGATTGGataggaatcacaggactgatttttctaattcccaaagacaagaaaaaattGTGAATGGAAGCGCCTCTTGTTAATACATGGTACAATAGCTTCGTTGTCGCACTGTAAAATAATGGTAGGGGTGGGCATTTGTCCCCCTACGGGATGGCAgatggatggagagctgaggatatggggtgtggcttgtctggtggtcctggaagtaCCTCTTGAAGACTGAGTGAAGTGATAGTGGAGTGGAGTTAAAACCCCTTAGTGAAATAgatatgtttaaaatgcaaatgtatcTGACACCGAGTCAATAGATGAAACGTTACTCCATTTGTCAAAAATTCCCTCCTATTCATAACAGTCAGCTGGAATTTGGTTCTTTGCTGTTTTCACATCCAACCAACTTGCGTATGACACTTTGTGTATGGACATAAGGGTCGCATATTACGATTGGACTTTTATTCTCTGTGTTGAATGTTTTTCACTAGCTGGATAataatcttaaattaaaaaaaaatttgtttacatttatttaagagACTAAATGAAGGCATAAATAGCCAATCAAAACAACAGAAGAGCTACAGGGGTAGACCCTGTAAAAAGTCTCATTTACTTAGGCATGGTGTAAATGGCAGactttttaaaggggtggtccagagtgtatttttaatccttggttgtgtttataagatacaAAGCAATGTGTGGTCATGCTTCATTTGTTGAAAatcatattgtttttttcatataaacAGTCAGAGTAGCTCTTTGCCATATCAGTTTATGCGTGAATCAGAAAGAAAATGAcaaagaggacacagctgaagtcaaatcTGACTTGCGTCTTTTACATATATTTGGAATGAGCATGTGTAAGTAAaatgaaatgttcacatatcttttgcgagatTATTTGAGATGCAGAATGCAGGAAATGAGAAGAAGAAGATAGAGAggatgtgctgctgaagattgtggctgtttataGTGGTTGATAAATATGAATCTGTAGCTACATTGCTAGCGGTGCCAAGctacgtccttgctacaacataccattaacgctagaaacGATACATGtcagatcaattttaacaaataaaaatagtta

Function

symbol description
ankrd28b Orthologous to human ANKRD28 (ankyrin repeat domain 28).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070622-4 Orthologous to human ANKRD28 (ankyrin repeat domain 28).

Ensembl:

ensembl_id ENSDARG00000009023

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019647 False 3605 mRNA 0.52 28 20055878 20151747
TCONS_00019648 True 6392 mRNA 0.45 29 20056030 20154859

Neighbor

gene id symbol gene type direction distance location
XLOC_009840 CU855688.1 coding upstream 246761 19805021 ~ 19809117 (+)
XLOC_009839 twist1b coding upstream 321729 19732543 ~ 19734149 (+)
XLOC_009837 BX005389.4 coding upstream 340668 19686713 ~ 19715210 (+)
XLOC_009838 BX005389.1 coding upstream 351340 19704424 ~ 19704538 (+)
XLOC_009836 tmem196b coding upstream 374596 19677484 ~ 19681282 (+)
XLOC_009842 c16h2orf66 coding downstream 6946 20161805 ~ 20164454 (+)
XLOC_009843 hacl1 coding downstream 12952 20167811 ~ 20194385 (+)
XLOC_009844 colq coding downstream 43205 20198064 ~ 20238985 (+)
XLOC_009845 fkbp14 coding downstream 140117 20294976 ~ 20305104 (+)
XLOC_009846 cpvl coding downstream 341832 20496691 ~ 20515806 (+)
XLOC_009833 NA non-coding upstream 541887 19508738 ~ 19513991 (+)
XLOC_009831 NA non-coding upstream 643457 19375634 ~ 19412421 (+)
XLOC_009847 NA non-coding downstream 375266 20530125 ~ 20531772 (+)
XLOC_009848 NA non-coding downstream 530081 20684940 ~ 20695517 (+)
XLOC_009854 mir196d non-coding downstream 758554 20913413 ~ 20913484 (+)
XLOC_009859 NA non-coding downstream 986189 21141048 ~ 21142516 (+)
XLOC_009862 NA non-coding downstream 1479528 21634387 ~ 21634836 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00021666 ankrd28 coding CM030130.1 CM030130.1 24279592 ~ 24307071 (-)