G229026



Basic Information


Item Value
gene id G229026
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 6657402 ~ 6657608 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU259896
CACTCTCTACTTAAACTATCTCTTACAGAGGATAAAACAGGGCGTTTCTGTCAAGTTAAGGATGTCAAACTAAAGACAAATGCTATTTAGTTTAAACTCATCATTTGATTTCGATAATTTCTAGTGGTACACATTCTTACATCGGTATATATTAATAACATCCTAGGTTAAATACTGATTATGATATTGAAGCAATATCACACGAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU259896 True 207 lncRNA 0.32 1 6657402 6657608

Neighbor


gene id symbol gene type direction distance location
CI01000053_06625828_06650150 NA coding upstream 7252 6625828 ~ 6650150 (+)
CI01000053_06554488_06572369 NA coding upstream 85008 6552524 ~ 6572394 (+)
CI01000053_06429917_06431273 NA coding upstream 225485 6429917 ~ 6431917 (+)
CI01000053_06300198_06301049 NA coding upstream 355367 6300198 ~ 6302035 (+)
CI01000053_06286516_06286956 NA coding upstream 370413 6286421 ~ 6286989 (+)
CI01000053_06725452_06758944 NA coding downstream 67844 6725452 ~ 6758944 (+)
CI01000053_06851564_06854586 NA coding downstream 193861 6851469 ~ 6854600 (+)
CI01000053_06855860_06878353 NA coding downstream 198156 6855764 ~ 6878839 (+)
G229012 NA non-coding upstream 32721 6624101 ~ 6624681 (+)
G228887 NA non-coding upstream 307283 6278806 ~ 6350119 (+)
G228916 NA non-coding upstream 341206 6314640 ~ 6316196 (+)
G228901 NA non-coding upstream 348053 6307340 ~ 6309349 (+)
G228785 NA non-coding upstream 414450 6242311 ~ 6242952 (+)
G229028 NA non-coding downstream 956 6658564 ~ 6659723 (+)
G228909 NA non-coding downstream 2286 6659894 ~ 6660095 (+)
G228899 NA non-coding downstream 2654 6660262 ~ 6662409 (+)
G229059 NA non-coding downstream 128410 6786018 ~ 6786360 (+)
G229066 NA non-coding downstream 136420 6794028 ~ 6794921 (+)
CI01000053_05471449_05512831 LRRC75B other upstream 1144328 5471449 ~ 5513074 (+)
G228257 NA other upstream 1278953 5375553 ~ 5378449 (+)
G227317 NA other upstream 2241809 4414951 ~ 4415593 (+)
G226399 NA other upstream 2959873 3620798 ~ 3697529 (+)
G226347 NA other upstream 3382491 3272374 ~ 3274911 (+)

Expression



Co-expression Network