G233200


Basic Information

Item Value
gene id G233200
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7983599 ~ 7983836 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264624
AAAGCATGTATGATATTATACTGCACATTCTAAGAAGTAAATATTACACTGATGCTAAGTTTGAGATCATACTTGATCTTCAGAGGTTGGACGCTGCCCTCTAGTGGCAAAACTACTGAATTATGCATGTAATACATCCATTTCTTTATTTGATAATGGAAAAAAGCTCCTCAATGTTTAGATAAAATTAAGCTTTCAGAGCAATATGAACAACTTTAGAGATAGTTGTACTTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264624 True 238 lncRNA 0.32 1 7983599 7983836

Neighbor

gene id symbol gene type direction distance location
CI01000054_07852818_07853423 ARL4AB, ARL4A coding upstream 129122 7852401 ~ 7854477 (+)
CI01000054_07836152_07845992 SCIN coding upstream 137367 7835604 ~ 7846232 (+)
CI01000054_07816225_07819805 TMEM106B, T106B, TMEM106BB coding upstream 162624 7816225 ~ 7820975 (+)
CI01000054_07755766_07787767 NA coding upstream 195489 7755766 ~ 7788110 (+)
CI01000054_07726558_07730944 TDP2B, TDP2 coding upstream 252588 7726558 ~ 7731011 (+)
CI01000054_07997892_08012569 BZW2 coding downstream 14056 7997892 ~ 8012883 (+)
CI01000054_08013660_08018583 RBBP7, RBBP4.L, RBBP4.S, RBBP4 coding downstream 29824 8013660 ~ 8018741 (+)
CI01000054_08056620_08072625 NA coding downstream 72670 8056506 ~ 8073345 (+)
CI01000054_08081739_08089067 NA coding downstream 97317 8081153 ~ 8089811 (+)
CI01000054_08149724_08152046 MYCLB coding downstream 165021 8148857 ~ 8152968 (+)
G233199 NA non-coding upstream 1643 7981313 ~ 7981956 (+)
G233198 NA non-coding upstream 2431 7980745 ~ 7981168 (+)
G233183 NA non-coding upstream 48962 7934385 ~ 7934637 (+)
G233180 NA non-coding upstream 52529 7930787 ~ 7931070 (+)
G233152 NA non-coding upstream 93789 7889580 ~ 7889810 (+)
G233206 NA non-coding downstream 106685 8090521 ~ 8095560 (+)
G233228 NA non-coding downstream 131763 8115599 ~ 8115863 (+)
G233233 NA non-coding downstream 137260 8121096 ~ 8121700 (+)
G233254 NA non-coding downstream 280482 8264318 ~ 8265518 (+)
G233262 NA non-coding downstream 300440 8284276 ~ 8284553 (+)
G233024 NA other upstream 373706 7567523 ~ 7609893 (+)
G232870 NA other upstream 1095096 6887912 ~ 6888503 (+)
G232659 NA other upstream 1607705 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 1676739 6305908 ~ 6312163 (+)
G232558 NA other upstream 1941736 5993660 ~ 6041863 (+)
G233306 NA other downstream 320763 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 322101 8325126 ~ 8329716 (+)
G235560 NA other downstream 2404300 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 3581140 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 3649140 11632959 ~ 11635103 (+)

Expression


Co-expression Network