Gene
RNA
| Item | Value |
|---|---|
| gene id | G235218 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 9248892 ~ 9249118 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU266790 | True | 227 | lncRNA | 0.20 | 1 | 9248892 | 9249118 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_09218869_09223868 | NA | coding | downstream | 24773 | 9218632 ~ 9224119 (-) |
| CI01000054_09077309_09080163 | NA | coding | downstream | 168080 | 9076831 ~ 9080812 (-) |
| CI01000054_08953766_08966617 | TMEM57, TMEM57A | coding | downstream | 282275 | 8952134 ~ 8966617 (-) |
| CI01000054_08937312_08942587 | LDLRAP1, LDLRAP1A | coding | downstream | 306305 | 8937312 ~ 8942587 (-) |
| CI01000054_08721571_08723333 | NA | coding | downstream | 524810 | 8721008 ~ 8724208 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | upstream | 202991 | 9452109 ~ 9482723 (-) |
| CI01000054_09483912_09484282 | MRPL36 | coding | upstream | 234694 | 9483147 ~ 9484282 (-) |
| CI01000054_09488559_09488870 | NA | coding | upstream | 239158 | 9488276 ~ 9488870 (-) |
| CI01000054_09495785_09497239 | IRX4B, IRX4 | coding | upstream | 246332 | 9495450 ~ 9497682 (-) |
| CI01000054_09531778_09544007 | NA | coding | upstream | 282392 | 9531510 ~ 9544510 (-) |
| G235217 | NA | non-coding | downstream | 29 | 9248637 ~ 9248863 (-) |
| G235210 | NA | non-coding | downstream | 11018 | 9237407 ~ 9237874 (-) |
| G235183 | NA | non-coding | downstream | 38371 | 9208018 ~ 9210521 (-) |
| G235204 | NA | non-coding | downstream | 48741 | 9199866 ~ 9200151 (-) |
| G235219 | NA | non-coding | upstream | 66 | 9249184 ~ 9249419 (-) |
| G235223 | NA | non-coding | upstream | 12135 | 9261253 ~ 9261551 (-) |
| G235224 | NA | non-coding | upstream | 12475 | 9261593 ~ 9261803 (-) |
| G235231 | NA | non-coding | upstream | 28021 | 9277139 ~ 9277358 (-) |
| G235239 | NA | non-coding | upstream | 43712 | 9292830 ~ 9293392 (-) |
| G235216 | NA | other | downstream | 354 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 2077219 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2594879 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 4039652 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 4576659 | 4670151 ~ 4681361 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 614203 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1554753 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 1621986 | 10871104 ~ 10881495 (-) |
| G236748 | NA | other | upstream | 2036076 | 11285194 ~ 11295784 (-) |
