G302601


Basic Information

Item Value
gene id G302601
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 253367 ~ 253666 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU343725
AGTTTACAGTCAAATGTAATCGTTAGAAATGACACTAGTACCACTACAATCCTAGCTAAGCTACATACAGTCTTCAATGCATGTTTGTGTGTCTGTGTGTGTGTGGTGTGTGTTGGAATGTGATCTGGCACTTAGTCCACATGAGGGGCCCTTTGATGTCCCAAGAGCTAGGAAATGGGGTTCTCTGTTTAACCTCAGAGGGTCCATGAAAGTGCCAAAGTGCTCGTCTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU343725 True 233 lncRNA 0.44 2 253367 253666

Neighbor

gene id symbol gene type direction distance location
CI01000091_00247680_00252574 NA coding upstream 638 246921 ~ 252729 (+)
CI01000091_00192431_00197288 NA coding upstream 55899 192431 ~ 197468 (+)
CI01000091_00161029_00165225 NA coding upstream 87885 160989 ~ 165482 (+)
CI01000091_00120666_00139417 TGFB1A coding upstream 113582 120666 ~ 139785 (+)
CI01000091_00039550_00086927 NA coding upstream 165182 39232 ~ 88185 (+)
CI01000091_00277114_00290224 PPP5C coding downstream 23448 277114 ~ 290224 (+)
CI01000091_00309199_00325636 NA coding downstream 55302 308968 ~ 325871 (+)
CI01000091_00359388_00360200 CLDNA coding downstream 104923 358589 ~ 360617 (+)
CI01000091_00366037_00366669 NA coding downstream 112371 366037 ~ 367204 (+)
CI01000091_00368135_00368878 NA coding downstream 114469 368135 ~ 368939 (+)
G302592 NA non-coding upstream 12096 241041 ~ 241271 (+)
G302591 NA non-coding upstream 12862 240295 ~ 240505 (+)
G302579 NA non-coding upstream 47677 205461 ~ 205690 (+)
G302566 NA non-coding upstream 62184 190901 ~ 191183 (+)
G302603 NA non-coding downstream 2464 256130 ~ 256648 (+)
G302609 NA non-coding downstream 11260 264926 ~ 265129 (+)
G302611 NA non-coding downstream 15740 269406 ~ 269695 (+)
G302631 NA non-coding downstream 54266 307932 ~ 308152 (+)
G302634 NA non-coding downstream 80022 333688 ~ 333932 (+)
G302512 NA other upstream 191200 59635 ~ 62167 (+)
G302679 NA other downstream 333246 586912 ~ 589526 (+)
G302768 NA other downstream 702244 955910 ~ 957032 (+)
G303132 NA other downstream 798957 1052623 ~ 1053014 (+)

Expression


Co-expression Network