CI01000091_00192431_00197288


Basic Information

Item Value
gene id CI01000091_00192431_00197288
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 192431 ~ 197468 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000091_00192431_00197288.mRNA
ATGTCCAAAAGATCCTGTCAGAGGGGCTCGGAAAAGAGCAGGGGATTTGAATGGGAGGAATGCAGGCTTTCCATCTTCGAGGATATGTCGAGGGAGAGAGCATTGATGAGGAAAAAATTCTCAGCAGCGAAGAAGTTACTCTGGGACCGTGAGATTCGACATGCCCTGGTTCATCCAACCACTCTGAAGTTTACTTGGAAGGGAAAAAAGCAGAGTTTTACTGACCACGTGGAAGCGGAAAGATATATAAAGGAACACATCCAACTACAAGGAGGCTGTGACTGGAAATATGATGACATAAAGATGTTTTTTGAAATTAATATTGGGTCAGCTCAGAGATTAGCAGTATGGGATGCATGTAAAGCATTTATCATGGGAAAATATATTGCTTATGCAAGTAGGGAAAAAAAAAAAAGTGTAGGAAAAGTGAAACTATTAGAAAAACAAATCAGTGATCTAGAAAAAGAATTGGTGCAACGTTTTACAGATTTGAAATTTAAACAGCTTTGTCAATTAAAATTTGATCTCCATGAATTCTTTAATAAAAAAACAGAATATGCATTATTTAGAATGAAGACCAAGTATTATGAGAGTGGGGAAAAATCTGGGAAACTTCTTGCTAGACAGATAAAGCAACATGATGCATGTCACATCATACCTGCAATTAAGAAGGGCAATAAGGTGCTCACTTCCAACAGAGAAATTAATAGGGTTTTCAACCAGTACTATTCAAAACTGTACACATCAGAATCCATTTACAGTCAGAAGGAAATAAAAGACTTTCTAGCTAATGTTACATTGCCCACTTTAACCCCTGACGAACAAGCCTCAATAGTTGGACCTATAACACAAGAGGAGGTCAGAACTATTATAATGTCTTTGAAACCTGGAAAATCACCAGGCTCTGACGGATTCCCAGTAGAATATTATAAGAAGTTTGTCGATGAGTTGACCCCAATATTAACTGAGATATATAAGCGATATAATGCTCCAGTGGCAGTCAGGCAGTGGCAGCATTCCATGATTTCAGGAGCAAAGCCCTGCCGCCCCATGAGAAGCATATTTGGAGTCACTGGATCTGGACTGGCAACATCAAATGAATGTGGAGATCTCATCAGGAGGCTTAGAATTGAAAATCCCTTTCATTTTAACTAGGAAAGTGTGAAGCACATCCTCTGACAATGGTTGACTTATTACTACAACCTGGAGTACACTCTTGGTGGAATCTCTCGCTCTGGTTGGAGCTGTGGTTCTAACTAATTGAATGCTGTTCAGAGTTTGGACTCCTTAAATTTGTGTCTTGACCTGAAAAGATCTCCATTGGTTTGTCTATCA
>TU343693
TGGACCTATAACACAAGAGGAGGTCAGAACTATTATAATGTCTTTGAAACCTGGAAAATCACCAGGCTCTGACGGATTCCCAGTAGAATATTATAAGAAGTTTGTCGATGAGTTGACCCCAATATTAACTGAGGTATATGCAGAGTATATGCAGAGGTACTTGATAATGACATGTTGATAATGACAGTTTTAATGAAGCCTTAATATCACTCATATCAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000091_00192431_00197288.mRNA False 1335 mRNA 0.39 4 192431 197468
TU343693 True 222 lncRNA 0.36 1 194433 194654

Neighbor

gene id symbol gene type direction distance location
CI01000091_00161029_00165225 NA coding upstream 26949 160989 ~ 165482 (+)
CI01000091_00120666_00139417 TGFB1A coding upstream 52646 120666 ~ 139785 (+)
CI01000091_00039550_00086927 NA coding upstream 104246 39232 ~ 88185 (+)
CI01000091_00247680_00252574 NA coding downstream 49453 246921 ~ 252729 (+)
CI01000091_00277114_00290224 PPP5C coding downstream 79646 277114 ~ 290224 (+)
CI01000091_00309199_00325636 NA coding downstream 111500 308968 ~ 325871 (+)
CI01000091_00359388_00360200 CLDNA coding downstream 161121 358589 ~ 360617 (+)
CI01000091_00366037_00366669 NA coding downstream 168569 366037 ~ 367204 (+)
G302566 NA non-coding upstream 1248 190901 ~ 191183 (+)
G302565 NA non-coding upstream 2530 189520 ~ 189901 (+)
G302563 NA non-coding upstream 5227 186807 ~ 187204 (+)
G302561 NA non-coding upstream 8610 182798 ~ 183821 (+)
G302555 NA non-coding upstream 20108 171930 ~ 172323 (+)
G302579 NA non-coding downstream 7993 205461 ~ 205690 (+)
G302591 NA non-coding downstream 42827 240295 ~ 240505 (+)
G302592 NA non-coding downstream 43573 241041 ~ 241271 (+)
G302601 NA non-coding downstream 55899 253367 ~ 253666 (+)
G302603 NA non-coding downstream 58662 256130 ~ 256648 (+)
G302512 NA other upstream 130264 59635 ~ 62167 (+)
G302679 NA other downstream 389444 586912 ~ 589526 (+)
G302768 NA other downstream 758442 955910 ~ 957032 (+)
G303132 NA other downstream 855155 1052623 ~ 1053014 (+)

Expression


Co-expression Network