Fish Transcriptome and Expression Database

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model fish

XLOC_036991 (CR847976.1)

Basic Information

Item	Value
gene id	XLOC_036991
gene name	CR847976.1
gene type	non-coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007120.7
NCBI id	CM002893.2
chromosome length	56459846
location	11447777 ~ 11447909 (+)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072815
TACCACAGCCATTAATCAACCTGCAGCTCAAGACTGGTTACTTATGATACTGGCAAGCTTAGCTATAAGCAGAGCTAagcttggtcagtacctggatgggagaccacatgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000083967

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00072815	True	133	rRNA	0.46	1	11447777	11447909

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_036990	wnt10a	coding	upstream	38086	11379782 ~ 11409691 (+)
XLOC_036989	wnt6b	coding	upstream	106462	11281969 ~ 11341315 (+)
XLOC_036988	asic4a	coding	upstream	218212	11034314 ~ 11229565 (+)
XLOC_036987	NA	coding	upstream	509308	10936773 ~ 10938469 (+)
XLOC_036986	gmppaa	coding	upstream	667117	10770880 ~ 10780660 (+)
XLOC_036992	cdk5r2b	coding	downstream	84116	11532025 ~ 11534622 (+)
XLOC_036993	si:dkey-69o16.5	coding	downstream	139720	11587629 ~ 11595736 (+)
XLOC_036994	tmem41aa	coding	downstream	996585	12444494 ~ 12455521 (+)
XLOC_036995	NA	coding	downstream	1013710	12461619 ~ 12469043 (+)
XLOC_036996	CR752651.1	coding	downstream	1380096	12828005 ~ 12828120 (+)
XLOC_036985	NA	non-coding	upstream	687664	10737086 ~ 10760113 (+)
XLOC_036982	NA	non-coding	upstream	882831	10562638 ~ 10564946 (+)
XLOC_036980	BX936345.1	non-coding	upstream	1103797	10343864 ~ 10343980 (+)
XLOC_036979	NA	non-coding	upstream	1290230	10155978 ~ 10157547 (+)
XLOC_037004	CR407547.1	non-coding	downstream	2000620	13448529 ~ 13448648 (+)
XLOC_037005	NA	non-coding	downstream	2021165	13469074 ~ 13471527 (+)
XLOC_037014	NA	non-coding	downstream	2664566	14112475 ~ 14117000 (+)
XLOC_036981	CR522881.1	coding	upstream	164580	10557144 ~ 11283197 (+)

Expression

Co-expression Network