arpc2 (arpc2)


Basic Information

Item Value
gene id arpc2
gene name arpc2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11265556 ~ 11274982 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792780.1
CGCGGAAGAGACAGGCGGAAGGAGCCTCGACGGAAGCGGTCAGGACTGtcaagggaggaaaaaaaattgcAGAATTTGACACAAAGAGGCTAATCCCACCAAACAGCACCGATCTTCCCCCCTTTTTCCTCGACACCCGCATCCGCTGCGATGATCCTGTTAGAAATCAACAACCGCATTATAGAAGAGACGCTGTCGTTGAAGTTTGACGGCGCATCCAACGGAACCAAGCCCGAGGCCGTCGATGTGACATTTGCAGATTTCGATGGCGTCTTGTACCACATCTCCAACCCCAATGgggacaagaccaaagtgatggtCAGCATCTCCCTGAAGTTCTACAAGGAGCTGCAGGAGCACGGCGCCGACGAGCTGCTCAAGAGGGTCTATGGGAATTTCCTCGTTTCAGCGGAGGCTGGCTACAACGTGTCCCTCCTCTACGACCTGGACGCGCTTCCAGCCAATAAAGATGAGGTTGTCCACCAGGCGGGGATGCTCAAGAGGAACTGCTTCGCCTCAGTGTTTGAAAAGTACTTCAAGTTCCAGGAAGAGGGAAAAGAGGGCGAGAAGAGGGCCGTGGTCCACTACAGAGACGATGAGTCCATGTATCTGGAGGcaaagaaagacagagtgaCCGTGGTGTTCAGCACGGTGTTCAAAGACGACGACGACGTCATCATCGGCAAAGTTTTCATGCAGGAGTTCAAAGAGGGTCGGCGGGCCAGCCACACAGCCCCCCAGGTGCTCTTCAGCCACAGGGAGCCCCCACTGGAGCTGAAGGACACAGATGCCGCTGTGGGGGACAACATTGGATACATCACTTTCGTTTTGTTCCCACGTCACACCAATGCCAATGCCAGAGACAACACCATCAACCTCATCCACACCTTCAGGGACTACCTGCACTACCACATAAAGTGCTCCAAGGCCTACATTCACACACGCATGAGGGCCAAGACGTCAGAATTCCTCAAGGTGCTGAACCGCGCTCGACCCGATGCCGAGAAGAAAGAGATGAAGACCATGTCTGGAAAGACCTTCTCCCGTTGAGGCtgacccctccctcccccccccaccaccagaGAAATTCAACCCCCCGTGGACATGCCCAAACGCGCTACACTGAGACTCACCGCCACATCGGACAGGACTCCAGGATGTCTCTAAATGCCCCCGCCCAGCCCCAAATACCAGTCCAgtctttttcctattttttttttttttttttattaaagaataATATTGTTGGCTCTACTTCAGGAAAGCCCAGGCTCAAgaaaaatgggggaaaaaaaaaatggcattcCTTGCTTTGCATAGTTAAAGAGAATTATTagtcctatataaatatatatatgagaacaaaattgaaatttttgATACGATATCTTTTACTCCATTTGGTACTCTTGCTTGCCCCTCAACCCTAACCATGTAATATCCATGTATTGGATGATTTCaatccccctccctccctctctgtgcttTTGTGTCGTCTGTACcattgtcatttaaaaaaaataaaaatgaagcaTCTCCCTGGTA

Function

symbol description
arpc2 Predicted to enable actin filament binding activity. Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in Arp2/3 complex-mediated actin nucleation. Predicted to act upstream of or within actin filament polymerization and regulation of actin filament polymerization. Predicted to be located in actin cytoskeleton; cell projection; and cytoplasm. Predicted to be part of Arp2/3 protein complex. Orthologous to human ARPC2 (actin related protein 2/3 complex subunit 2).

NR:

description
PREDICTED: actin-related protein 2/3 complex subunit 2

GO:

id name namespace
GO:0030833 regulation of actin filament polymerization biological_process
GO:0005856 cytoskeleton cellular_component

KEGG:

id description
K05758 ARPC2; actin related protein 2/3 complex, subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792780.1 True 1545 mRNA 0.50 10 11265556 11274982

Neighbor

gene id symbol gene type direction distance location
LOC120554137 NA coding downstream 4904 11253646 ~ 11260652 (-)
LOC120554135 NA coding downstream 33172 11230221 ~ 11232384 (-)
LOC120554133 NA coding downstream 44570 11154926 ~ 11220986 (-)
LOC120554132 prps2 coding downstream 114905 11140537 ~ 11150651 (-)
LOC120554130 NA coding downstream 159724 11104367 ~ 11105832 (-)
LOC120554144 NA coding upstream 31779 11306761 ~ 11314144 (-)
LOC120554143 LOC104935050 coding upstream 39700 11314682 ~ 11323086 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding upstream 95971 11370953 ~ 11387252 (-)
LOC120554150 NA coding upstream 195469 11470451 ~ 11502481 (-)
tns1a NA coding upstream 292589 11567571 ~ 11684433 (-)
G234032 NA non-coding downstream 113005 11151842 ~ 11152551 (-)
G234024 NA non-coding downstream 171374 11041186 ~ 11094182 (-)
G234026 NA non-coding downstream 182388 11060811 ~ 11083168 (-)
LOC120554121 NA non-coding downstream 307266 10957910 ~ 10958290 (-)
G233939 NA non-coding downstream 341740 10915974 ~ 10923816 (-)
G234051 NA non-coding upstream 9810 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 30629 11305611 ~ 11306703 (-)
G234078 NA non-coding upstream 57299 11332281 ~ 11332560 (-)
G234080 NA non-coding upstream 58385 11333367 ~ 11334089 (-)
G234152 NA non-coding upstream 61628 11336610 ~ 11341839 (-)
LOC120554131 NA other downstream 126311 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 218597 11037355 ~ 11046959 (-)
G233954 NA other downstream 296446 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 740471 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 877623 10383688 ~ 10387933 (-)
spega LOC103358966 other upstream 113570 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 183955 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 249400 11524382 ~ 11538321 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 1003537 12278519 ~ 12293143 (-)
G234405 NA other upstream 1678108 12953090 ~ 12954125 (-)

Expression


Co-expression Network