G234080


Basic Information

Item Value
gene id G234080
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11333367 ~ 11334089 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU317876
acttgtcttactctgggggtgtTAAGATGGCCGCATAGCGGTTGGATAATGACAGCAGGAGACTTGAGGCAGAGGTATGGTGCAGATCTTACAGGTGTTTATTTCCCCATCAATTAACACATAACTTGGAAGCCATGAGCGCATCCAACAAAACTGAGCACCACAGGCAACATGTGGTCCAGACAGCAGCAGTGCTAGTAAACTGGCAGCCTTTTATAGCCTGCGACTGATCTTATCGACCCTACCATAGTGCCAGGTAAGTCTGAAATGTACTCCATTTAAACAGttatacacaaaacaacaaccacatcaAACACATTTTGACTAATCTACTCTTATCTCAATTTACTTGCATTTGTTACCTAATACAAGCACACATAGTTAGTTTAGCAAGTACAGTCAATTAAAGTACTCCAACACCCCTCCGCCACATGAAACACGGTATCTCCCGGAACCTTTAAAATGGGGCTCGATACGCTGGGGACTCTTTTAGCCTGAGGACTCTGAAGAGGAGACACAACAGAGGTGAGTTACTTGAACACCAACTTTCTATTGTACAAACAGCAACAGTTCactagtggtgggcagatcgaggcttcgtgaaacagttgaagcaaatgtgccatattgtgtcgaggcttcgaaacaatctgaaacccgtctcaacgatgacacctagtggtcacttggaggtgttgatctgaaacaaccttgataacgagc

Function

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU317876 True 723 lncRNA 0.44 1 11333367 11334089

Neighbor

gene id symbol gene type direction distance location
LOC120554143 LOC104935050 coding downstream 10281 11314682 ~ 11323086 (-)
LOC120554144 NA coding downstream 19223 11306761 ~ 11314144 (-)
arpc2 arpc2 coding downstream 58385 11265556 ~ 11274982 (-)
LOC120554137 NA coding downstream 72715 11253646 ~ 11260652 (-)
LOC120554135 NA coding downstream 100983 11230221 ~ 11232384 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding upstream 36864 11370953 ~ 11387252 (-)
LOC120554150 NA coding upstream 136362 11470451 ~ 11502481 (-)
tns1a NA coding upstream 233482 11567571 ~ 11684433 (-)
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding upstream 374238 11708327 ~ 11715150 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding upstream 384092 11718181 ~ 11724139 (-)
G234078 NA non-coding downstream 807 11332281 ~ 11332560 (-)
G234063 NA non-coding downstream 26664 11305611 ~ 11306703 (-)
G234051 NA non-coding downstream 48277 11284792 ~ 11285090 (-)
G234032 NA non-coding downstream 180816 11151842 ~ 11152551 (-)
G234024 NA non-coding downstream 239185 11041186 ~ 11094182 (-)
G234152 NA non-coding upstream 2521 11336610 ~ 11341839 (-)
G234153 NA non-coding upstream 9872 11343961 ~ 11345876 (-)
LOC120554171 NA non-coding upstream 285745 11619834 ~ 11620856 (-)
LOC120554169 NA non-coding upstream 286780 11620869 ~ 11621353 (-)
G234181 NA non-coding upstream 350533 11684622 ~ 11685167 (-)
LOC120554131 NA other downstream 194122 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 286408 11037355 ~ 11046959 (-)
G233954 NA other downstream 364257 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 808282 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 945434 10383688 ~ 10387933 (-)
spega LOC103358966 other upstream 54463 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 124848 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 190293 11524382 ~ 11538321 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 944430 12278519 ~ 12293143 (-)
G234405 NA other upstream 1619001 12953090 ~ 12954125 (-)

Expression


Co-expression Network