LOC120554137


Basic Information

Item Value
gene id LOC120554137
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11253646 ~ 11260652 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792772.1
CGCCAAACATGCTGGCAGCGGTGTTCGAAGGCATGattgaatgagagagagagttgaCAGCGACAGAGAGCGTTTTCGGCTAGAGAGTCACTTGATAGATGTAATGGATAGGCTACAGCAGGTGATCTGCAGGGATGCAGGTACCTTCGTCGCTCATCTGTTCAGTTCCTGGGTTTCTCCTCGCGGTTACAAACGGCAACATGTCTAAACCGAGAGACTACAGCAGCCAGTCCTACTCCCCGGGCAGCACGGGACCGCTCAAAAGCAACCCGAGTCAAAACGGGATCGACCCGTCGGGCAAATCCAGGGAAAAGGACGACATGGTTGGACTCAATGACAAGTTCGTCAGGTTGATTGACAAGATGAAACACCTGGAGGATGAGAACAAAAAGCTCGACACGAAGCTGAAGATCCTCAAGGAGCAGGAGGACTACGAGGGGAAAATCGACGACACGGTCAAGCAGCTGGAGAACGAGCTGGAGCAGCAGATTGAGAACTTGCTCCACGACCAAGAAAAACTGCATGCTGCACTGCTCAAGAACCAGGAGGAGGTGCAGGACACCAAGAAGAGgTATGAGGAggaatatttgaaaaaaactgaCCTGGAGAATGAGTTTATTGTCAAGAAACAGGATGTAGATGAAGGTCAATTGGAGGCAGTAGATCTGGTTCTGGAGCTGGAGGACCTGATTGGAAAACTGGAGTTCCTCAGGATTGGCTATGACGAGGAGCTCAAGGAGCTGGAGTCGCACGTCCAGAATGCGACAGTGGTCTTACGTGACAACAGCAAACGGTCTCTGGACATGGACGAGATCATCGAGAATGTCAAGAATCAGTATGCCAACATGGCTGCCCGCAGCAGGGACGAAGCCGAGCACTGGAACCAGAAAAAGATGGATGCCATGGTCTCAAATGCAGGACAGCGTGAGCAGGAAGTGCGTGATTTAAGGAGGGAGATCTCAGACCTGGTGCGCCACATCCAGAGGCTCAACGGGGACCTGGAAGCTCTCAAAAGGAAGgaaGAGTCCCTGAACAAGGACATCAGTGACGCGAGGACAGAAGGCGAAGACAACCTGCTGAAGGCTCGGGACGACATTTCCCAGCTGGAGGATGCCTTGAGACGGGCCAAGCAGGACTTGGCGGGACAGATCCGCGAACACCAAGCGCTGATGAACCTCAAGTTGGCCCTGGACATCGAGATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGCAGAGAATGAACTACCATATGCGCCACGCAGACGTTCACTTGCCAAAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAAAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCCACCAGAGAAGCCACAAGCCCCAGCACCCACAGTCGTCCCGGTAGATACAGCTGTCCCGGCGGTGTACCCCGCCTTGAAGAAACGCCTGCTGATCCGGGTGGAGGTGGAGGCGGGCAGAGTCGTGTCCGAAAGCTCCCTTTATACTGAAGACTGACCGGCACTGTCCATCACACCTCTGTCTGCAGCATTAAATGAAATATATCCGCAAAATGTGaataacaaatatttaaattaagTAAAATTTGGAAGGATCGTCATGAAAGTGTATTTAAATGCAATAATCATGTTTAGTTTGTGTGCTTTCTGCAGtctaataacaataacaatagcTTCTTGGCAGGTCGAACGTCATTTTTCTAGAACTCGTGCTTAAAGTTGGAGACAGTTTGTTTATGTCGAGCAgtgctttttaaaaaagggtTTTCTTATCTTTCTTTGCCTTGGCGAAGACTTGTGTTCCTGGTACTATCGGTGTATTTGTTTCAGCTTTCTTGCAGTTGTTTCTCTCATAGCTTTTTGAGCTTAATAAGATTTTGTCTCTGTAGAAAAAGAAACTGTGTAAAGGTTTCTTAAtgatgtgaaaaataaaatgaggaaCTGTTCTGATGCACAACATCTTGTTAATATCGGGAAGGATATTCACAAAGATAACGCTTCCTACACGAGGTCACATTAACGGGAGGCATACATGGATCTGGGGTAGAACTGAATGCTTGAAATGGCTTTTCATACTGCTTTGGAAttgttctctttctctcacatgTATCTGCACCTTTAGAACTCAAATAGGCTATAAATAAACAAAGCACCATGAACAATA
>XM_039792773.1
GattgaatgagagagagagttgaCAGCGACAGAGAGCGTTTTCGGCTAGAGAGTCACTTGATAGATGTAATGGATAGGCTACAGGTGATCTGCAGGGATGCAGGTACCTTCGTCGCTCATCTGTTCAGTTCCTGGGTTTCTCCTCGCGGTTACAAACGGCAACATGTCTAAACCGAGAGACTACAGCAGCCAGTCCTACTCCCCGGGCAGCACGGGACCGCTCAAAAGCAACCCGAGTCAAAACGGGATCGACCCGTCGGGCAAATCCAGGGAAAAGGACGACATGGTTGGACTCAATGACAAGTTCGTCAGGTTGATTGACAAGATGAAACACCTGGAGGATGAGAACAAAAAGCTCGACACGAAGCTGAAGATCCTCAAGGAGCAGGAGGACTACGAGGGGAAAATCGACGACACGGTCAAGCAGCTGGAGAACGAGCTGGAGCAGCAGATTGAGAACTTGCTCCACGACCAAGAAAAACTGCATGCTGCACTGCTCAAGAACCAGGAGGAGGTGCAGGACACCAAGAAGAGgTATGAGGAggaatatttgaaaaaaactgaCCTGGAGAATGAGTTTATTGTCAAGAAACAGGATGTAGATGAAGGTCAATTGGAGGCAGTAGATCTGGTTCTGGAGCTGGAGGACCTGATTGGAAAACTGGAGTTCCTCAGGATTGGCTATGACGAGGAGCTCAAGGAGCTGGAGTCGCACGTCCAGAATGCGACAGTGGTCTTACGTGACAACAGCAAACGGTCTCTGGACATGGACGAGATCATCGAGAATGTCAAGAATCAGTATGCCAACATGGCTGCCCGCAGCAGGGACGAAGCCGAGCACTGGAACCAGAAAAAGATGGATGCCATGGTCTCAAATGCAGGACAGCGTGAGCAGGAAGTGCGTGATTTAAGGAGGGAGATCTCAGACCTGGTGCGCCACATCCAGAGGCTCAACGGGGACCTGGAAGCTCTCAAAAGGAAGgaaGAGTCCCTGAACAAGGACATCAGTGACGCGAGGACAGAAGGCGAAGACAACCTGCTGAAGGCTCGGGACGACATTTCCCAGCTGGAGGATGCCTTGAGACGGGCCAAGCAGGACTTGGCGGGACAGATCCGCGAACACCAAGCGCTGATGAACCTCAAGTTGGCCCTGGACATCGAGATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGCAGAGAATGAACTACCATATGCGCCACGCAGACGTTCACTTGCCAAAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAAAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCCACCAGAGAAGCCACAAGCCCCAGCACCCACAGTCGTCCCGGTAGATACAGCTGTCCCGGCGGTGTACCCCGCCTTGAAGAAACGCCTGCTGATCCGGGTGGAGGTGGAGGCGGGCAGAGTCGTGTCCGAAAGCTCCCTTTATACTGAAGACTGACCGGCACTGTCCATCACACCTCTGTCTGCAGCATTAAATGAAATATATCCGCAAAATGTGaataacaaatatttaaattaagTAAAATTTGGAAGGATCGTCATGAAAGTGTATTTAAATGCAATAATCATGTTTAGTTTGTGTGCTTTCTGCAGtctaataacaataacaatagcTTCTTGGCAGGTCGAACGTCATTTTTCTAGAACTCGTGCTTAAAGTTGGAGACAGTTTGTTTATGTCGAGCAgtgctttttaaaaaagggtTTTCTTATCTTTCTTTGCCTTGGCGAAGACTTGTGTTCCTGGTACTATCGGTGTATTTGTTTCAGCTTTCTTGCAGTTGTTTCTCTCATAGCTTTTTGAGCTTAATAAGATTTTGTCTCTGTAGAAAAAGAAACTGTGTAAAGGTTTCTTAAtgatgtgaaaaataaaatgaggaaCTGTTCTGATGCACAACATCTTGTTAATATCGGGAAGGATATTCACAAAGATAACGCTTCCTACACGAGGTCACATTAACGGGAGGCATACATGGATCTGGGGTAGAACTGAATGCTTGAAATGGCTTTTCATACTGCTTTGGAAttgttctctttctctcacatgTATCTGCACCTTTAGAACTCAAATAGGCTATAAATAAACAAAGCACCATGAACAATA
>XM_039792774.1
CCTTGTCCCCCTTAAAAGCAGGTGATCTGCAGGGATGCAGGTACCTTCGTCGCTCATCTGTTCAGTTCCTGGGTTTCTCCTCGCGGTTACAAACGGCAACATGTCTAAACCGAGAGACTACAGCAGCCAGTCCTACTCCCCGGGCAGCACGGGACCGCTCAAAAGCAACCCGAGTCAAAACGGGATCGACCCGTCGGGCAAATCCAGGGAAAAGGACGACATGGTTGGACTCAATGACAAGTTCGTCAGGTTGATTGACAAGATGAAACACCTGGAGGATGAGAACAAAAAGCTCGACACGAAGCTGAAGATCCTCAAGGAGCAGGAGGACTACGAGGGGAAAATCGACGACACGGTCAAGCAGCTGGAGAACGAGCTGGAGCAGCAGATTGAGAACTTGCTCCACGACCAAGAAAAACTGCATGCTGCACTGCTCAAGAACCAGGAGGAGGTGCAGGACACCAAGAAGAGgTATGAGGAggaatatttgaaaaaaactgaCCTGGAGAATGAGTTTATTGTCAAGAAACAGGATGTAGATGAAGGTCAATTGGAGGCAGTAGATCTGGTTCTGGAGCTGGAGGACCTGATTGGAAAACTGGAGTTCCTCAGGATTGGCTATGACGAGGAGCTCAAGGAGCTGGAGTCGCACGTCCAGAATGCGACAGTGGTCTTACGTGACAACAGCAAACGGTCTCTGGACATGGACGAGATCATCGAGAATGTCAAGAATCAGTATGCCAACATGGCTGCCCGCAGCAGGGACGAAGCCGAGCACTGGAACCAGAAAAAGATGGATGCCATGGTCTCAAATGCAGGACAGCGTGAGCAGGAAGTGCGTGATTTAAGGAGGGAGATCTCAGACCTGGTGCGCCACATCCAGAGGCTCAACGGGGACCTGGAAGCTCTCAAAAGGAAGgaaGAGTCCCTGAACAAGGACATCAGTGACGCGAGGACAGAAGGCGAAGACAACCTGCTGAAGGCTCGGGACGACATTTCCCAGCTGGAGGATGCCTTGAGACGGGCCAAGCAGGACTTGGCGGGACAGATCCGCGAACACCAAGCGCTGATGAACCTCAAGTTGGCCCTGGACATCGAGATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGCAGAGAATGAACTACCATATGCGCCACGCAGATttctaaaaacaaaccaaccaatCCAAGTCCTTACTTGCACGCAGACGTTCACTTGCCAAAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAAAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCTGCCAGAGAAGCACCTCCCACC

Function

GO:

id name namespace
GO:0045095 keratin filament cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792772.1 True 2222 mRNA 0.49 10 11253646 11260652
XM_039792773.1 False 2185 mRNA 0.49 10 11253646 11260618
XM_039792774.1 False 1351 mRNA 0.53 9 11254463 11260329

Neighbor

gene id symbol gene type direction distance location
LOC120554135 NA coding downstream 21262 11230221 ~ 11232384 (-)
LOC120554133 NA coding downstream 32660 11154926 ~ 11220986 (-)
LOC120554132 prps2 coding downstream 102995 11140537 ~ 11150651 (-)
LOC120554130 NA coding downstream 147814 11104367 ~ 11105832 (-)
LOC120554129 LOC103361269,LOC104942788,LOC103151927 coding downstream 152493 11095516 ~ 11101153 (-)
arpc2 arpc2 coding upstream 4904 11265556 ~ 11274982 (-)
LOC120554144 NA coding upstream 46109 11306761 ~ 11314144 (-)
LOC120554143 LOC104935050 coding upstream 54030 11314682 ~ 11323086 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding upstream 110301 11370953 ~ 11387252 (-)
LOC120554150 NA coding upstream 209799 11470451 ~ 11502481 (-)
G234032 NA non-coding downstream 101095 11151842 ~ 11152551 (-)
G234024 NA non-coding downstream 159464 11041186 ~ 11094182 (-)
G234026 NA non-coding downstream 170478 11060811 ~ 11083168 (-)
LOC120554121 NA non-coding downstream 295356 10957910 ~ 10958290 (-)
G233939 NA non-coding downstream 329830 10915974 ~ 10923816 (-)
G234051 NA non-coding upstream 24140 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 44959 11305611 ~ 11306703 (-)
G234078 NA non-coding upstream 71629 11332281 ~ 11332560 (-)
G234080 NA non-coding upstream 72715 11333367 ~ 11334089 (-)
G234152 NA non-coding upstream 75958 11336610 ~ 11341839 (-)
LOC120554131 NA other downstream 114401 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 206687 11037355 ~ 11046959 (-)
G233954 NA other downstream 284536 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 728561 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 865713 10383688 ~ 10387933 (-)
spega LOC103358966 other upstream 127900 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 198285 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 263730 11524382 ~ 11538321 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 1017867 12278519 ~ 12293143 (-)
G234405 NA other upstream 1692438 12953090 ~ 12954125 (-)

Expression


Co-expression Network