unc50 (unc50)


Basic Information

Item Value
gene id unc50
gene name unc50
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 10208422 ~ 10215472 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793191.1
tgaAACGCATGATACCGGAAGTAGCTACGTGTTCATTTTCGCGACAGTTCAGGAAGCATCTACCGAAACAGCTAGCTACAGATTCAGAAACGAGTTGGTGCTTCTCCTGCGAAGGAGTACAGCAAAAACAGCACCATGTTGCCGACCATCTTGCCGGACAGCAATGGCGCCCTCGGTGCTAGGGATGCTGCACGTCACACAGCAGGCGCCAAGCGCTACAAGTACCTGCGACGGCTGCTCCGTTTCAAACAGATGGACTTTGAATTTGCCCTGTGGCAGATGCTTTACTTGTTTACGTCACCGCAGAGAGTCTACCGCAACTTCCACTACAGGAAACAGACCAAGGACCAGTGGGCCAGGGACGACCCTGGTTTTCTTGTCCTGCTCAGCATCTGGCTGTGTGTGTCCACAATAGGCTTTGGTCTGGTGCTGGACATGGGAGCAGTGGAGACTctgaagctgctgctgtggGTGGTCTTTGTTGACTGTATAGGAGTTGGCCTTCTCATATCAACCCTCATGTGGGTTATCAGCAACAAGTACCTGCTTAAACATCCCAGCAAAAATTTTGATGTGGAGTGGGGCTACGCATTTGATGTTCACCTCAATGCCTTCTACCCTCTTCTAGTCATCCTGCATTTCCTGCAGCTCTTCTTCATCAACCaTATTGTGGTAATAAACTCTGACTGGTTCGTGGGATACTTTGTCGGTAACACCATGTGGCTAATAGCCATTGGTTATTATGTCTACATCACGTTTTTAGGGTACAACGCTCTACCCTTCCTGAAGAACACCGTGGTGCTGCTCTACCCCTTCGCTCTGCTCGGCCTCATCTACGTCCTCTCCGTCTCTCTGGGCTGGAACTTCACTAAGGGTCTCTGCTGGTTTTACAAGTACCGCGTCCAGTAGGACCAGTTTCTCTCTGAAGTTGGATACTAGTTGGCTCCAGGCCATCTCACAATCTGTTTTCAACTCACATCTAGCTGACAGCAAATCCATTTCCAGCTTCTGTCAGTCAACATCTGTTTGGGAAGAACTCTGGTTGACTCTCATCAAACGGGGACGCCGTCTTTATTGGCACTGAGCCGAGTTGACTGTTGCTCGACTCTGAATTGACTCTGTTGATTTTCTGTTTGGCTCTTATGTTGAGCTGGAGCTCCAAAGTCAGTAAACTGTGATGTGTTTGGACTAGTTGCAGAAACTGGGGCAGATGTGCTACAGCTTTTATTGTGGTTCTTTTTGTATGATTTGTAAATACTCTGGCAggttgtaatatatatatatatatacccagaCGGTTGTTTCTGAAGAGTaaacatttgctttttttctttaaaaaaaaataatagacaAAAATCAAATCCTGCTTAttgaagagaaaaaaggaaagtgGAGGAACATGGAATggacactttttttcccccccttttcttttttttttatcctaaaGTGTACATTCCAAAGCACTTTCAATAAAAGGTTTTATTAACTTA

Function

symbol description
unc50 Predicted to enable RNA binding activity. Predicted to act upstream of or within protein transport. Predicted to be located in Golgi apparatus and nuclear inner membrane. Predicted to be integral component of membrane. Predicted to be integral component of Golgi membrane. Orthologous to human UNC50 (unc-50 inner nuclear membrane RNA binding protein).

NR:

description
PREDICTED: protein unc-50 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793191.1 True 1493 mRNA 0.46 6 10208422 10215472

Neighbor

gene id symbol gene type direction distance location
sox1b sox1,LOC104929113,LOC102792425 coding downstream 245902 9960572 ~ 9962520 (-)
tubgcp3 tubgcp3 coding downstream 354862 9840242 ~ 9853560 (-)
rcbtb1 LOC104942332,LOC103356759 coding downstream 470193 9732514 ~ 9738229 (-)
cdadc1 cdadc1 coding downstream 478435 9723040 ~ 9729987 (-)
LOC120554042 LOC103356755,LOC100697050 coding downstream 550505 9631179 ~ 9657917 (-)
harbi1 harbi1 coding upstream 46351 10261823 ~ 10265122 (-)
kpnb3 ipo5 coding upstream 59559 10275031 ~ 10287161 (-)
gpr180 gpr180,LOC102794014 coding upstream 174479 10389951 ~ 10398975 (-)
ddx3xb LOC101487926 coding upstream 196963 10412435 ~ 10428605 (-)
slc5a3a slc5a3,LOC104962291 coding upstream 219842 10435314 ~ 10443050 (-)
G233675 LOC104966322 non-coding downstream 947 10206152 ~ 10207475 (-)
LOC120554344 NA non-coding downstream 12046 10191223 ~ 10196376 (-)
LOC120554591 NA non-coding downstream 58006 10129535 ~ 10150416 (-)
G233662 NA non-coding downstream 80857 10126900 ~ 10127565 (-)
G233660 NA non-coding downstream 110556 10097627 ~ 10097866 (-)
G233685 LOC103356767 non-coding upstream 5406 10220878 ~ 10222175 (-)
LOC120554081 NA non-coding upstream 157516 10372988 ~ 10374931 (-)
G233855 NA non-coding upstream 509657 10725129 ~ 10725359 (-)
G233857 NA non-coding upstream 522163 10737635 ~ 10738167 (-)
G233858 NA non-coding upstream 522865 10738337 ~ 10738549 (-)
arhgef7b arhgef7,LOC102205121,LOC101465658,LOC100696931 other downstream 31612 10152861 ~ 10176810 (-)
G233644 NA other downstream 166016 9965692 ~ 10042406 (-)
G233510 LOC103372156,LOC102206165,LOC102306683 other downstream 580481 9525789 ~ 9627941 (-)
G233521 zc3h13,rpl31,LOC106575915,LOC102795706 other downstream 649582 9553485 ~ 9558840 (-)
G233436 NA other downstream 867011 9339944 ~ 9341411 (-)
G233703 atg13 other upstream 55597 10271069 ~ 10272859 (-)
LOC120554082 NA other upstream 168216 10383688 ~ 10387933 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other upstream 248850 10464322 ~ 10525085 (-)
G233954 NA other upstream 732996 10948468 ~ 10969110 (-)
LOC120554127 NA other upstream 821883 11037355 ~ 11046959 (-)

Expression


Co-expression Network