gpr180 (gpr180,LOC102794014)


Basic Information

Item Value
gene id gpr180
gene name gpr180,LOC102794014
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 10389951 ~ 10398975 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792681.1
GTAACTTGACGCAGCTAAGCCTGTTCACTTCTGGCTTCGTGGCTCATTGAATTCGTTAGCTAACGTTTATTTGTCGATAACGTTGAACTGCATAAGGGAAAATGTCGTATTTATTAGTCACGTTTGTGGCTATAGTGCTGCTAAGTTCGGAGGCCTCTGGGAAAAGCGTTACGGGACTTTTTAACAGCGAAGCAGCGAGACAGCAGAATGGCCAGTTCATCACTAAATTTATGTACCAAGGTGATAATGGTATGTTGGTGATCAGGCTGGACAATTCTGCTCTGGCTACAGAGAAGGAGTCCAGATTGCTGCTGTATAAGGATATGGACTCAAGCCTTGACAACCTAAACTGCTCTGAGAGGCTCGCTAAAGCTCACATCCCCGTTTCTCTCAGTGACCAAGAACACAACCAGACGATCCCTCGTCAGTCCTCTCCTACAACCTGGCAGGCCCTATATGCTGACAGATACACATGTCAGgaAAATGCAGTGATTCCTTCCCACGCTGATCTCAGTTTTACCATCTTGTTGTTTAACGCCGACTCGGCTGGAAATCCTCTGGAGCACTTCAGCGCAGAGGAGGCAGGTCTCCATAGTTTTtacttcctcctcctgctggcCTACTTCATAGCCTGCTGTATCTACATCCAGCCTCTGCACCAGGCTCTGAGGAAAGGAGGTCCCATGCACACTGTCCTCAAAGTGCTGACCACCGTGCTGGCATTACAGGGCTTCTCCGCTCTCTGCAACTACATCCACTTCGCCAGGTATTCCAGAGATGGTACTGGTATTCCTCTGATGGGCAACCTGGCAGAGTTCTGGGATATGGTGTCCCAGGTGTCCATGCTGTACATGTTACTGAGTCTGTGTGCGGGCTGGACTCTGAGCCGAGGCAGGAAGCCTCAGTCCAGACCTCTGCAGTGGGAACGGTCTCCGGCGTCCACGGCTGTTGCTGTTGGCGGAGTCGTTCTACAGGGGGCGTTGCTGCTGTGGGAGCAGTACTCAGAATCGGAGAGTCAACATCGCAGCTACCACACCCCGCTGAGTCTGGCAGGTCTCCTCCTCATGGCTCTGAGAGTGGGCCTGGCCCTCCTGCTGGCCTCTGTCCTCTACCAGATCATCTCCACCGAGCGGAGCACCCTGAAGAGGGACTTCTACCTCTGCTTCGCCAAGGGATGCTTCCTGTGGTTCCTCTGTCATCCCGTCCTCTTCGTCACGTCGGCTGTCTTCAACAAGCACCAGAGGGAGAAGGTAGTGACTATCGGTGTTATCCTCTGCCAGGCCATCGCCATGGTGATCCTCTACCAGCTCTTCCTGTCTCGTTCTCTCTACTGGGaggtctcctctctctcctcggTGTCTCTGCCACTCACCATGTCCAGAACGAACCACAGGGGGCGCTACTGAGCACATCCACTCTTGCGCTTTATGAGCGAGGGGAGAAACATGCTACAACACAGAGGCGTCCCACCTCCCTTAACGTCCCAGGGTGTCAGAGGAGGGACACCTCCTGAGCATGAAGACAGAGAGCGGTGTAACACTGCAGGGACCGCTCTCCTTCACTGTTAACTGTTACCTATTGGTTACTGGTAAGCAATTTAGCAGGGAACTGTAGCACGGGGTCACAAAATGACCAGAGGAAGATATTTACAGCAACACCCTACCTCTAGTTACTGGAGCCAACATCTACATTACTGAGCAGGAGGAAAGCTGTTTAATGCAAGACGACCTAGAGAAGGGACACGAGGCTTTCCGTGACACGCTGGATGTCATAATAACTAACAGCCAAAAGTACAGCTTGAAAACCGACTCACGCGAGCatgttaaccctcctgttgtcctcgggtcaaatttgacccgttttcaaagtttctatatatTAGAAATTggggttttttttcaacctaatttcccaaaaataacatggatggttccatacaatgctCTGCTCAAGTTAAATgaaggatcagttcactactttcattgaattgtgggtgttttattcaatgttatagcatttgaaaaaaacagttgGTTTTAAAAACAGCACCCTGACTAAACGTCTACATACCTTCCTCTGATCTtgactattagtcaaaataattcacaatttcagctttttaactCAAACATTAGATATAACTTCATATAAATGACGTTTATTGACCATTAgttccagaaaaaaaaagtgtaaaaaaaaaactaataaattgGTGTTAgtcgtgaaaaaaaaaaaaaaaagcacagaaaaaagagacagaaaagtgTCAATTTTGGACCCTGGAGGACAACaagtcgacgggaagacaacacaagggttaaagatgGATCGCCAAGATTCAAGATTTTAGGATGCGTctgcaaatgaaaaaaaaaaaagattggctCGTGATGGAACAAATACAATCTTTGTGCTCTTGGCTTTGATAATCCCACTTTTATGTCTTAAAGGATAAGGCCggtatatttttcttattgtcaacaaatcccatgaaaagccaaaatcaacaattagtatgtctgtattttttttttacttttcagcCCAGTCTGTGGCCATTGGTTCCTATGAAGAtgttcatttttcaaaacttgtcaaaaatatatagtttcattttcaaaaacgtctccgtgattTCCTAGAACAGCTGGGCGCCGCAGTTGTGACGCAGATGCTACTCAAACAGGAGGAGATTGTGCATTTCTGGGTACTATTTTTTTCACCTGCGGAtgaatccacatttggtgctctggtGAGTATTTCTGGCAGCAGGTCCATGAACGTTGGATTAAGTCAAAACAAactacggtgtgtgtgtgttcatggtaatgaaggaatATGTCACCCATGCAACAGTGTGGCTagttaatgtgtttttaatagttgttggacaacaatggagttCTATGGTAAAGAGAAATGcaatatatcaggctttggctcCACAGACAATACATTGTAGGTCTTTTCATGGGttttatttacaataagagaatactgTAGATTAGTATGTGTATATTAATGAATCAGTATGTGGTAAGATTGATATGTGACTCTGGTTAAACAGATTGAGGTGGAGAGACAGTTGGGCGGACTCAAAGATGGATATACTGAAGAACAGACAGGTGGAAGGATGAATCAAGTTTGGAAAGATGGTTACAGTATGTGGACTGGTAAAGAAATAGATTTTCAGTTACCTATATTAAAAGGATTAGTGAGCCAACAGGTCAGTGTGTGCTCCCTGTACATGATGGATCAAGCTGTACTTTAAGTTATTTCTTCACTCTCAACATGAATTTTTGAACTGACAGCATGTGAACCTTTGGAATTGTATAAACTGTATGTAGCTGGAGACACACTGCACgatcttttatttttcattcactGAACCTTGAGCTGGAGCACACTACCTGGGCCAATGATTTCCCCAATTCCAAACTAACGCTTACCTTTTCTGCCACAAATTATTAAGCCCTGGTCTAAGCCCACTATGACTCCATGTGAGTGAGGCTCATTAAAGCATTAGCGTCGCATGAAAGCCCAGTGGGAACAGGCCTGCTGTTTCattttggacttgacacatttCGTATTGTGAAAAATGAAATTCCACTTAACGTAGTGACGGCTGACATTGAGCGTTGACATATTTATtcattctgtatttatttttgtaagtcAATATTTGTAACGTGAATGAAGAGAATACATCttctatgtattttattttgtcccaCGGGCCACAATGACAATCTTATTTTTattagaaaacaacaaaatataagGCCTCGGTTTGTAATGTGTGTACTAAACTTTTACCCCTCAAATTTTTAGATATGgttcaaatttaatttaattctgTCATTCCCTTTTTTGCATTATGCCCTCTCCAGTTTTTATTACGTGTATTTATTTTCCGATACAACCCAAACTGTGGAAATATGGGATCTGTGGTCATTACAACTGTAATAAAGTAACtgtaataaaatacattttaaggtAACCTA

Function

symbol description
gpr180 Orthologous to human GPR180 (G protein-coupled receptor 180).

NR:

description
integral membrane protein GPR180-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0019236 response to pheromone biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792681.1 True 4004 mRNA 0.43 10 10389951 10398975

Neighbor

gene id symbol gene type direction distance location
kpnb3 ipo5 coding downstream 102790 10275031 ~ 10287161 (-)
harbi1 harbi1 coding downstream 124829 10261823 ~ 10265122 (-)
unc50 unc50 coding downstream 174479 10208422 ~ 10215472 (-)
sox1b sox1,LOC104929113,LOC102792425 coding downstream 427431 9960572 ~ 9962520 (-)
tubgcp3 tubgcp3 coding downstream 536391 9840242 ~ 9853560 (-)
ddx3xb LOC101487926 coding upstream 13460 10412435 ~ 10428605 (-)
slc5a3a slc5a3,LOC104962291 coding upstream 36339 10435314 ~ 10443050 (-)
LOC120554088 ptgfrn coding upstream 132852 10531827 ~ 10542635 (-)
LOC120554089 NA coding upstream 152974 10551949 ~ 10591069 (-)
LOC120554091 fam184a,LOC102306171,LOC101485268,LOC103474971,LOC108246794,LOC107092234,LOC102213346,LOC100706589 coding upstream 196114 10595089 ~ 10649932 (-)
LOC120554081 NA non-coding downstream 15020 10372988 ~ 10374931 (-)
G233685 LOC103356767 non-coding downstream 167776 10220878 ~ 10222175 (-)
G233675 LOC104966322 non-coding downstream 182476 10206152 ~ 10207475 (-)
LOC120554344 NA non-coding downstream 193575 10191223 ~ 10196376 (-)
LOC120554591 NA non-coding downstream 239535 10129535 ~ 10150416 (-)
G233855 NA non-coding upstream 326154 10725129 ~ 10725359 (-)
G233857 NA non-coding upstream 338660 10737635 ~ 10738167 (-)
G233858 NA non-coding upstream 339362 10738337 ~ 10738549 (-)
G233859 NA non-coding upstream 344099 10743074 ~ 10743463 (-)
G233872 LOC103371278,LOC105416747,LOC103151953,LOC102216808,LOC101483471,LOC108246769 non-coding upstream 375194 10774169 ~ 10775658 (-)
LOC120554082 NA other downstream 2018 10383688 ~ 10387933 (-)
G233703 atg13 other downstream 117092 10271069 ~ 10272859 (-)
arhgef7b arhgef7,LOC102205121,LOC101465658,LOC100696931 other downstream 213141 10152861 ~ 10176810 (-)
G233644 NA other downstream 347545 9965692 ~ 10042406 (-)
G233510 LOC103372156,LOC102206165,LOC102306683 other downstream 762010 9525789 ~ 9627941 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other upstream 65347 10464322 ~ 10525085 (-)
G233954 NA other upstream 549493 10948468 ~ 10969110 (-)
LOC120554127 NA other upstream 638380 11037355 ~ 11046959 (-)
LOC120554131 NA other upstream 737652 11136627 ~ 11139245 (-)
spega LOC103358966 other upstream 989577 11388552 ~ 11441926 (-)

Expression


Co-expression Network