AMCG00000737


Basic Information

Item Value
gene id AMCG00000737
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1824869 ~ 1830750 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000737
aGTTACTACGAGACGAGTGACCTGCCGTCCGCGATCGGGGTGATGCAGGAGGCGCTGGACAGACACCCCGGGCTGGTCAGCGTGGAGGCAGTCAACATGGCCGCCGAGCTGTACATCGCCAACCGCCAGCACCGCCGCGCCCTgaagGTGCTGCAGCAGTTCTGTGCGATCACCCTGGAGCGGGACAGTGCCAAGCAGGAGGCGGGCGAGGGGGAGGGAGCGCTGAAGGACGAGGGAGCGGccgagggaggagaggggaaggaggagggCGAGGCCGAGGCCAAGGGCGAGGTGCAGGCGGTGCAGATCGCAGAGGAGGTGCCCGTGGACATCCGTGTGAAGCTGATGGTGTGTCTGATCCACCTGCAGATGTTCAAACCCCTGGATAGCTACAGTAAGGTGGTGGCCATGGCGCCCCTGCACCTGGAGGCGCGGCTGTCCCTGTCCaccctgcagcagcagctgggcCGGCCGCAGCGCGCGCTTGACGCCCTGGAGCCCATGCACGACCCTGACACGCTGGCCCAGGATGCTGGCGCCGCGCAGCAGgAGCTGAAGCTGCTGCTCCACCGGTCCACTCTGCTGAAATCACAGGGCCGGCCCGATGACTACACCGACACCATGCTCACCATGCTGGCCATGCTGCTGAAGGTGGCAATGAACCGTGCTCAGGTGTGTCTGATCTCCAGCTCGTGCTCCGGGGAGCGTCACCTGCACCTGATCAAGCTGCTGCTGGACACGGTGATGGTGCTGTGCCAGCGCATGCGCTTCGCCGAGGCCGAGCTGCTCGTGGACTCGTCCCTTGAGTACTACTCCTTCTACGATGACCGCGCCAAGAGGAAGGAGCTGGAGTACTGTGGCCTGTCCGCCGCCGTGCTCGACCGCAACTACCGCAAGGCCTACAGCTACATCCGgcTCATGCTGATGGACAGTGTGGAGCGTGCCCAGCTGTGGAACGTGTTTAACCAGGTGACCCTGCACTCCCAGGACGTGCGGCACCATCGCTTCTGCCTGCGGCTGCTGCTGAAGAACCCGGAGCACCACGCGCTCTGCGTGCTCAACGGACACAACGCCTTCGTCTCCGGCAGCTTCAAACACGCGCTGGgtcagtATGTGCAGGCGTTCCGTGCGCACCCCAATGAGCCCCTCTACAGCCTCTGTGGCTTCTCGTTCCTGAACCGCTACATGGAGCTGCGGGGGCCGTGCCAGGAGAGCTTCTACAACACGGGCCGGGCTCTGCAGCAGATGGGCCTGGCGCACTTCGCGATACACTACTACCAGCAGGCCCTGCAGTGTCCCCCGCCACAGCTGGAGCTCCATCTCCAGGGCAAACACGTCCCCCGCGGAGGGAGCTCCCACCTGCTCTCCCTCATcatccccctcttcctccccaTCCAtctcttcatcctcctcctcctcctcctcttgctgctccccctcccccagcatGGAGGCAAAGGCACGCTGCACCGAGGGGCTCACCCCCTCCTCTGA

Function

GO: NA

KEGG:

id description
K15201 GTP3C3, TFC4; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000737 True 1494 mRNA 0.65 11 1824869 1830750

Neighbor

gene id symbol gene type direction distance location
AMCG00000738 NA coding upstream 26438 1792408 ~ 1798431 (+)
AMCG00000730 LOC107389566,LOC107095702,LOC101072759,LOC105358294 coding upstream 114473 1704794 ~ 1710396 (+)
AMCG00000725 NA coding upstream 180231 1638355 ~ 1644638 (+)
AMCG00000724 dnajb11 coding upstream 203478 1613837 ~ 1621391 (+)
AMCG00000722 NA coding upstream 230266 1590362 ~ 1594603 (+)
AMCG00000736 NA coding downstream 38829 1869579 ~ 1873692 (+)
AMCG00000735 vps16,LOC101164202,LOC106575790 coding downstream 44248 1874998 ~ 1885085 (+)
AMCG00000733 rpe,LOC106919839,LOC103134215,LOC108239723,LOC101467395,LOC102796346,LOC100692108 coding downstream 54830 1885580 ~ 1889165 (+)
AMCG00000745 NA coding downstream 112898 1943648 ~ 1945167 (+)
AMCG00000750 NA coding downstream 134281 1965031 ~ 1969537 (+)
G125756 NA non-coding upstream 202981 1617808 ~ 1621888 (+)
G125767 NA non-coding upstream 215659 1594823 ~ 1609210 (+)
G125736 NA non-coding upstream 397926 1426633 ~ 1426943 (+)
G125713 NA non-coding upstream 496230 1323503 ~ 1328639 (+)
G125684 myo1b non-coding upstream 517534 1304095 ~ 1307335 (+)
G125955 NA non-coding downstream 461085 2291835 ~ 2293872 (+)
G125986 NA non-coding downstream 596920 2427670 ~ 2520585 (+)
G126036 NA non-coding downstream 727242 2557992 ~ 2558257 (+)
G126044 NA non-coding downstream 935505 2766255 ~ 2766539 (+)
G126050 NA non-coding downstream 1040166 2870916 ~ 2885184 (+)
AMCG00000734 NA other upstream 10712 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 126296 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 218838 1599696 ~ 1606031 (+)
G125561 NA other upstream 1421278 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 3630551 5461301 ~ 5465981 (+)
G127134 NA other downstream 6786449 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 8269533 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 10168914 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 10458200 12288950 ~ 12385042 (+)

Expression


Co-expression Network