RNA id: AMCG00000737


Basic Information

Item Value
RNA id AMCG00000737
length 1494
RNA type mRNA
GC content 0.65
exon number 11
gene id AMCG00000737
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1824869 ~ 1830750 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aGTTACTACGAGACGAGTGACCTGCCGTCCGCGATCGGGGTGATGCAGGAGGCGCTGGACAGACACCCCGGGCTGGTCAGCGTGGAGGCAGTCAACATGGCCGCCGAGCTGTACATCGCCAACCGCCAGCACCGCCGCGCCCTgaagGTGCTGCAGCAGTTCTGTGCGATCACCCTGGAGCGGGACAGTGCCAAGCAGGAGGCGGGCGAGGGGGAGGGAGCGCTGAAGGACGAGGGAGCGGccgagggaggagaggggaaggaggagggCGAGGCCGAGGCCAAGGGCGAGGTGCAGGCGGTGCAGATCGCAGAGGAGGTGCCCGTGGACATCCGTGTGAAGCTGATGGTGTGTCTGATCCACCTGCAGATGTTCAAACCCCTGGATAGCTACAGTAAGGTGGTGGCCATGGCGCCCCTGCACCTGGAGGCGCGGCTGTCCCTGTCCaccctgcagcagcagctgggcCGGCCGCAGCGCGCGCTTGACGCCCTGGAGCCCATGCACGACCCTGACACGCTGGCCCAGGATGCTGGCGCCGCGCAGCAGgAGCTGAAGCTGCTGCTCCACCGGTCCACTCTGCTGAAATCACAGGGCCGGCCCGATGACTACACCGACACCATGCTCACCATGCTGGCCATGCTGCTGAAGGTGGCAATGAACCGTGCTCAGGTGTGTCTGATCTCCAGCTCGTGCTCCGGGGAGCGTCACCTGCACCTGATCAAGCTGCTGCTGGACACGGTGATGGTGCTGTGCCAGCGCATGCGCTTCGCCGAGGCCGAGCTGCTCGTGGACTCGTCCCTTGAGTACTACTCCTTCTACGATGACCGCGCCAAGAGGAAGGAGCTGGAGTACTGTGGCCTGTCCGCCGCCGTGCTCGACCGCAACTACCGCAAGGCCTACAGCTACATCCGgcTCATGCTGATGGACAGTGTGGAGCGTGCCCAGCTGTGGAACGTGTTTAACCAGGTGACCCTGCACTCCCAGGACGTGCGGCACCATCGCTTCTGCCTGCGGCTGCTGCTGAAGAACCCGGAGCACCACGCGCTCTGCGTGCTCAACGGACACAACGCCTTCGTCTCCGGCAGCTTCAAACACGCGCTGGgtcagtATGTGCAGGCGTTCCGTGCGCACCCCAATGAGCCCCTCTACAGCCTCTGTGGCTTCTCGTTCCTGAACCGCTACATGGAGCTGCGGGGGCCGTGCCAGGAGAGCTTCTACAACACGGGCCGGGCTCTGCAGCAGATGGGCCTGGCGCACTTCGCGATACACTACTACCAGCAGGCCCTGCAGTGTCCCCCGCCACAGCTGGAGCTCCATCTCCAGGGCAAACACGTCCCCCGCGGAGGGAGCTCCCACCTGCTCTCCCTCATcatccccctcttcctccccaTCCAtctcttcatcctcctcctcctcctcctcttgctgctccccctcccccagcatGGAGGCAAAGGCACGCTGCACCGAGGGGCTCACCCCCTCCTCTGA

Function

GO: NA

KEGG:

id description
K15201 GTP3C3, TFC4; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157676 lncRNA upstream 10712 1811683 ~ 1814157 (+) True AMCG00000734
TU157621 lncRNA upstream 202981 1617808 ~ 1621888 (+) True G125756
TU157646 lncRNA upstream 215659 1594823 ~ 1609210 (+) True G125767
TU157592 lncRNA upstream 397926 1426633 ~ 1426943 (+) True G125736
TU157567 lncRNA upstream 496230 1323503 ~ 1328639 (+) True G125713
TU157877 lncRNA downstream 461085 2291835 ~ 2293872 (+) True G125955
TU157948 lncRNA downstream 596920 2427670 ~ 2520585 (+) True G125986
TU158014 lncRNA downstream 727242 2557992 ~ 2558257 (+) True G126036
TU158024 lncRNA downstream 935505 2766255 ~ 2766539 (+) True G126044
TU158031 lncRNA downstream 1040166 2870916 ~ 2885184 (+) True G126050
AMCG00000734 mRNA upstream 12635 1805407 ~ 1812234 (+) False AMCG00000734
AMCG00000738 mRNA upstream 26438 1792408 ~ 1798431 (+) True AMCG00000738
AMCG00000730 mRNA upstream 114473 1704794 ~ 1710396 (+) True AMCG00000730
AMCG00000729 mRNA upstream 126296 1685980 ~ 1698573 (+) False AMCG00000729
AMCG00000725 mRNA upstream 180231 1638355 ~ 1644638 (+) True AMCG00000725
AMCG00000736 mRNA downstream 38829 1869579 ~ 1873692 (+) True AMCG00000736
AMCG00000735 mRNA downstream 44248 1874998 ~ 1885085 (+) True AMCG00000735
AMCG00000733 mRNA downstream 54830 1885580 ~ 1889165 (+) True AMCG00000733
AMCG00000745 mRNA downstream 112898 1943648 ~ 1945167 (+) True AMCG00000745
AMCG00000750 mRNA downstream 134281 1965031 ~ 1969537 (+) True AMCG00000750
TU157662 other upstream 128622 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 224230 1599696 ~ 1600639 (+) False AMCG00000723
TU157377 other upstream 1483098 339640 ~ 341771 (+) False G125561
TU159397 other downstream 6786449 8617199 ~ 8620195 (+) True G127134
TU159756 other downstream 8317107 10147857 ~ 10154187 (+) False AMCG00000949
TU160309 other downstream 10168914 11999664 ~ 12011425 (+) True AMCG00001002
TU161370 other downstream 13339161 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 13578362 15409112 ~ 15420880 (+) False G128823

Expression Profile