AMCG00001356


Basic Information

Item Value
gene id AMCG00001356
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26481391 ~ 26488991 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001356
ATGGAGCCAGCCTTAGCAAGCGTTAGCAAGCTTCACCCAGGCGCAGCCAATGCAGCcttcagtgtttcccaaccctATCGGGTGGTAGCCAACAATGGGGTCATCAGGCTGAGGTGCTCCTTCAGCTTCAAAGGGAAAGGCGAAGAGCTCAGGGTCACATTACTTCGGGGGATGGGGGAAGAGTCTATCCTTTGTGCCTCCTCTTTCTACCTTCCCAACTCCACATTCCAGACAAAAGGACCTGTCGTCTGCCAGGGAGAAGCCAGCAGGGATGGTGTAGAACTCACTGTGTCTGGTCTGCTGGGCTCTGACACAGATTTGTACCGCTGCAGTCTGGAAATTATGTACCCGCCACCGTATCGACGGAGGTTCGGAAATGGAACCATTATCTATATTCCTGAAAAAACGGAGTGCCCTGCTGCTGTCAGACAAGAAATTGGGAATATCTTATATGTGTTGCCAATATCCATATTAGCATTTACTACCATCATCgtaattttcattttgaccTATAGGTTATTCAGTCTAAAATACAGAAGAACAGAATATGTGGACATGGCACCTGTGCTCTCCAGGAAAGTGGACTGTCGGTTTGGCTATGAGAATTTTTTGTGA

Function

GO: NA

KEGG:

id description
K06538 CTLA4, CD152; cytotoxic T-lymphocyte-associated protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001356 True 615 mRNA 0.48 4 26481391 26488991

Neighbor

gene id symbol gene type direction distance location
AMCG00001355 NA coding upstream 28061 26445081 ~ 26453330 (+)
AMCG00001353 NA coding upstream 190543 26284460 ~ 26290848 (+)
AMCG00001347 LOC103029249,LOC108423993 coding upstream 212394 26231286 ~ 26268997 (+)
AMCG00001352 NA coding upstream 291521 26187889 ~ 26189870 (+)
AMCG00001351 NA coding upstream 340565 26122843 ~ 26140826 (+)
AMCG00001357 NA coding downstream 22566 26511557 ~ 26519285 (+)
AMCG00001360 NA coding downstream 48961 26537952 ~ 26545509 (+)
AMCG00001363 NA coding downstream 347496 26836487 ~ 26838265 (+)
AMCG00001364 NA coding downstream 515654 27004645 ~ 27042352 (+)
G130948 NA non-coding upstream 146101 26296707 ~ 26335290 (+)
G130884 NA non-coding upstream 418698 26061148 ~ 26062693 (+)
G130839 nol5,nop58,LOC106575044,LOC106594422 non-coding upstream 751554 25727853 ~ 25729837 (+)
G130817 NA non-coding upstream 805909 25675217 ~ 25675482 (+)
G130792 NA non-coding upstream 847815 25633234 ~ 25633576 (+)
G131017 NA non-coding downstream 281889 26770880 ~ 26771161 (+)
G131021 NA non-coding downstream 304280 26793271 ~ 26793553 (+)
G131072 NA non-coding downstream 489784 26978775 ~ 26980289 (+)
AMCG00001337 sumo1 other upstream 731890 25735555 ~ 25749501 (+)
AMCG00001331 NA other upstream 1031081 25423687 ~ 25450310 (+)
AMCG00001315 NA other upstream 1874919 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 2027006 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 2035158 24424565 ~ 24446233 (+)
AMCG00001361 NA other downstream 367608 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 415372 26904363 ~ 26954597 (+)

Expression


Co-expression Network