G130884


Basic Information

Item Value
gene id G130884
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26061148 ~ 26062693 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU164023
GTTACTCAGTTACAATGGATATGTtttgaaacaaaactgaaataatgttgttttttttttttttttttttattattcctgccttgtgtcaAAACAGCTTTCAGACTATTTCAAACTGTAAACAACAATAACCACTTTAAATCATTCATGACAGACAGTCACTATACTATTATAAAAGCACAGGAATGCATTGGAAAGTCTATTTttgtaaaaggaaaacagtGGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164023 True 227 lncRNA 0.29 2 26061148 26062693

Neighbor

gene id symbol gene type direction distance location
AMCG00001338 NA coding upstream 335469 25718904 ~ 25725679 (+)
AMCG00001333 NA coding upstream 387381 25663865 ~ 25673767 (+)
AMCG00001335 NA coding upstream 424809 25630047 ~ 25636339 (+)
AMCG00001334 NA coding upstream 479772 25552444 ~ 25581376 (+)
AMCG00001332 NA coding upstream 695852 25363893 ~ 25365296 (+)
AMCG00001350 NA coding downstream 12877 26075570 ~ 26097013 (+)
AMCG00001349 NA coding downstream 37585 26100278 ~ 26117478 (+)
AMCG00001351 NA coding downstream 60150 26122843 ~ 26140826 (+)
AMCG00001352 NA coding downstream 125196 26187889 ~ 26189870 (+)
AMCG00001347 LOC103029249,LOC108423993 coding downstream 168593 26231286 ~ 26268997 (+)
G130839 nol5,nop58,LOC106575044,LOC106594422 non-coding upstream 331311 25727853 ~ 25729837 (+)
G130817 NA non-coding upstream 385666 25675217 ~ 25675482 (+)
G130792 NA non-coding upstream 427572 25633234 ~ 25633576 (+)
G130789 NA non-coding upstream 478542 25582342 ~ 25582606 (+)
G130773 NA non-coding upstream 610290 25450516 ~ 25450858 (+)
G130948 NA non-coding downstream 234014 26296707 ~ 26335290 (+)
G131017 NA non-coding downstream 708187 26770880 ~ 26771161 (+)
G131021 NA non-coding downstream 730578 26793271 ~ 26793553 (+)
G131072 NA non-coding downstream 916082 26978775 ~ 26980289 (+)
AMCG00001337 sumo1 other upstream 311647 25735555 ~ 25749501 (+)
AMCG00001331 NA other upstream 610838 25423687 ~ 25450310 (+)
AMCG00001315 NA other upstream 1454676 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 1606763 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 1614915 24424565 ~ 24446233 (+)
AMCG00001361 NA other downstream 793906 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 841670 26904363 ~ 26954597 (+)

Expression


Co-expression Network