AMCG00001331


Basic Information

Item Value
gene id AMCG00001331
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25423687 ~ 25450310 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001331
ATGTCTGCCTTCCCTTGTGGAATTTTCCAGTTGAAGCCAGTAGACCTCATCAACTGGTCTCAACTGGAATTAACTGGAATTAACTGGTCTGCCCTGGTCACCAGTAGACTTACCAATTGGTCCCAACTGctgtctgtctctctggacccctctctctccctgcccctcAGGCACCGGCTGGACCATGAGCAGCGGGAGTCGCGGCGGAAGCTGCGGGAGAGccgggagagagagggcaggcaGGCGCTGCTGGTGACGAAGCTCCAGAGCAAGGTGTGTGAGTATCGTGCCCGCTGTcagcagctggagcagcaggtGATGAGTCGAGAGACTGAGCTACGCAGAAAAGAGATGTGGACTCGAGAGGAGCACAGCGACAGCCTGGAGGGCGCCCTCATCAGGttggaggaggagcagcagagGAGCTTAGGCCTTGCTGAGCTGAACTCTCTCCTGCGCAGTCAGCTCAACCAATTAGGCGAGGTGAATGAAGCCCTGAGGGAGGACCTGGAGAAGCTCACAGCTGATTGGACAAGAGCTGTAGAGGAAGTGGGGCAAAAAGAAGTGGAATggcaaaaagagagagaaCTGCTAACAGCCCACATTAGCGATGAGCACAATCGTCTGCTGTCTCTCTGGAAGGAGGTGGTGACTTTCCGGCGTCACTTTCAGACCATGAAGACTGCCACCGACCGGGATCTCTGGGAGCTGAGGGCCGACTTCTCACGCTTGTCAACCTCTCTGCTGATGAGCTGCAGCACCGTGAGCTCCAGTCCTCCCCTGGCCACCCTGCCCGCTCCCCAGGACCCCTCCATCTCCCTGCCGCCCCCCCTCACCCTGCAGGACCTCTCGGAGGAGCTGCGGGAGAAGGAACAGGAGGCCGCCGTGCTGCGCCTCCAAACACAGGCGGAGAGAGAGGATCTGAGGGCCAAAGTTGTCTCTAGACAGAAGGCTTATGGGAAAGCTGCTCCTTTCTCTTCACAAGAGAGTACAACAGAGGGGCTGACATTCCTGCTCGCTGCCATTGCAGAGGCTGAGAGTGCCCTCCAGTGGAAACACCAGGAACTGCAGGAAACAGAATTGTGTCTGAAAAAGGCCTTACTGGAGCGAGAGACTGAGTGCAAGTTATTGGAGCAGCGAATCACAGAGCTGGAACAGGAGGGGGAGGAGCTAAAGGCCAGGGTGGGCCGAGAAGAGCAGTTGCTGAGAGACACCCAAGAGTCACTCGAGAGCAAGAGGGCGGCTGTGGTCTCCCTGAAGAGCCAACTTGAGGAGTCGGAGCGACAGGCCGAGGCGGTGAGGAAGGAGAATGCGTACCTGaggatgcagagagagagggaggaggaggagaggcgagagatggagaaagaaaatgagaaatgGCTGCGGGCCCAGGAGCAGGAGAGCGTCCAGAGCAGCCAGCGGGAAGCTGGGAGGAGGCAGGAGCTGCTGGGCCTGAGGGAAGCCCTGGAGAGCGCCCAGCTGGACCGGACCCTggcccagagagagagcagcgaGCTGAGGGACGCCCTGTTCACGGCCCGGGAGTCTCTCCGCAACCTGTCGGTTTCACAGGACCAGCTGAAGAAGGACTTGGCAGACTCTCGCGACTCCCTGGAGAAGATGGCCGATCTGAATGAAGCACTGGCAGCAGACAAGAGGGACCTGAACGCACAGACTCTGCAGCTGGAGATGCAGCTGGCTAGTGTGCGCTCCCGACTGGAGGCGCTGGGATCCGAGAGCCTCTCCCTTCACCAGGAGCTCAAGACGGTGTCCCAGGAGGCGGCAGAACTCAGGTCCCAGAGGGCGCAGCACCAGGACTCCCTGCGACAAGCCACGGACAGGGAGAgtgagctggagagagaggccAGCAGACTGAGGGAGGAGCGGGAGAAAGACCTGGGCTGGCTGGAAGAGCTGTCTGGCCTGCATGGAGCGGCCTGCTCTGAGCTGCAGGGCCTGCGGGAGGAGCTAAGCAGGGCATCTGAGTGCCTGAGCCGCGccgagagagagaaggaggccGTGCTGCAGGAAGGAGAGAGGCTGGGGAGCAGCATGAGGGCGTCACACTGCGAGTCTCTGCAGCTCCAGCTCtccctgaccaatcagaagaaCTCCAGCCTTGAAATAGTGCAAGGTCAGCTGGAGGTTAAAGTTCAGATGCTGCTGCAGGCCAAGGAAGTCCTACAGGGGGAGATCCGGTGTCTGCGCACGGAGCTGCAGAGCGAAGTGGCCAGGCTGGAGCAGGAGAGGGCGGGGTGGCGGGAGGAGAGCGAGCAGAGCCAACGGGAGCAAGAGAACACAGGGGCTGAGATCGAGAGGCTCCTGCAGGCACTGGCCCAGGCGGAGGAGAGGCGGAgggtggaggtggaggagagGGAACGGGAGAGGGAGGGCTGGCAGCGAGAGAGGGAGGCGTTGAGCTCGGAGCTGGGGGAAAGGGATGGAGAGGTGGGGACACTGGGCCAGAGGGCCGAAGCTCTGGTACGGGAACTCGAGGAGCTGTCAGAGGTGCTGAGTGGGAGAGAGGCTGAGATCGAGGAGCTCCAGAGCAAGGAAGCAGCTGAGCGTAGGGCCAAGGAGGAGAAACTCCAGGGGATCAGTGAAGAGGCGAGGAGGTGGAGAGCCAGGGTGGAGGCTCtcgagaaggagagagagggactgtgCCGCCaggtggaggaaggggaggCCCTGAGGGAACGGGCTcgggagctggagctggggagGGATGAGCTGGCGGCGGAGCTGAGGGAGAAGGAGTTGGCTCTGAAGGACAAGGAGGGAAACATTAGGCGCTTAGAGACCAGGGTGCAGAtgctggagggggagagagatgatCTAAGCTCGGTGCTGAGAGGCAGGGAGGGCCTGGAGGGGAGGGTGGCAGCACTGGAGCGCCTGAACTCCGAGctgagggacagggagaggctGAGTCAGAGGGCgctgagagaggaggaagagaaagggcgacggggggaggaagagagggagagactcaGGAGCTcctggagggagagggaggaaagaCTAAGGGGGGATGTGCTGCAAAGGGATGTAGAGATAGAAAGATTGACGAGTAGAATCGGGGCCttagagagagagtgggaggagACCAGGGTGCAAAAGGACGAGCTCAGGAGGGAAGATGAGAAGAAGGCGGCTCATTtgagggacagagaggaggaggtggagaggaTGAGGGACACTCTACGCAGAGGGGAGGAAGAGGCAGCTGCCAAGTTCCAGCAAAGTGAGGGCAAGGTGAGGCGGCTGGAGGCGAGAGTACAGGAGCTGGAGACACTCAAAGAGGTGCTCAGCGGCCAGCTTAGAGAGGTGCAGGtgacacgagagagagagagggcagagaaAGAAGAACAGCTGAGGGAGACAACCCAGGAGCTTAGGAATGCTCAGAGAGAGATCCAGACACTGAGTGAAAGACTGCAGGAGAGcaacagggagagggagagggtgttACAGCAGGctgagaagagggagagggaggtggagagTTGGAAAGAGATGGCAGAGGAAAGGGTGAGGGAGGTGGGTAAGATGGTGCAGCGTCTCCAGGAAAAGGAAGAAGAGGTGGAAAGGCTGAAAGATAGGGCAGAGGAAAGCAGTGGGGAGAGGGAGCAAATGGCACAATGCCTCGGAGAAAGGGAGCAGGAGGTGAGGCAGTTGCAGGACAGGGTGGAGGCAACGGAGGAGGAGCGGGAAGACTTTGCGTTTCggttgagagagagggacaagGAAATGGAGAGACTGGAGGCTCGAGTTGGGGAGCTTCAGCAGGGACAGCGGGCCTTGTTGGAGGAGAAAGGGGGGCAGGTGAAGCTTCTGGGGGACCACGTGCAGGATCTGGACAATGAAAGGGAACGCCTATCTACAGAACTGAAGACAATGGAGCAGGAGGTGGTGGCTCTGAGAGGCGCACTGGACCAAGCACAGCAAGAGATAGAGATGAGAAGCGGCTCTTTGAGGCTGCGAGAAGAAGAGATCCAGGATATAAAGACGTGCAGGGAGGCCACGTTAGCCCAGTTAGATGGTCTGAGGGTGATGGTGGAGGAGgtgaagaaggagagagaccaAGCGAGAGCAGAAGTCAGGGACAAGGAGGGAGAGAACCAGCAGATGCGAGAGGGGCTGAAGTCCAGCATTAAAGAGATGGGGACACTGAAAGAGCTTTTGGAGGAGAGCCACCGGGAAGGGGAGAAGTTGAGGGCCATCTTGAAAGACAAGACCGAGGAGTtggtgagggggagggaggagcaTGTGAGAGTGACTAAGGGGGAGATGGAGGAGCTGAGGAGTAGGATCAAGATTGTAGAGCAAGAGAGGCAGGAACTGAGTTGTCAGCTTGGAAGCTTGATGATTGAGAGGGAACGTtgggaggaggagagcagagaaACCAGAACTCTGAGAGAAAGACTGGAGGATCTATATAGGGCTGAGCTGAAGGAGAGGGATGCAGAAGTAGCCAGCatgagggagagggaaggggcATTGGAGAAGCAGAGGGAAGAATGGAGTTTGGTGATGGCAGAAAGAGACCGAGAGATCACCAACCTGAGGGAGAGAGCCAGGGaacaggagagagagtgggCAGCGCTCAGAGAAGAGGAGAGTCGGGAGATGGAGAGACTGAAGCAGGGGGTGGAGACACTGGGGAGGGAAGGGTCAGAAAAACTGCAGAGGGTGGAGAGGGAGGCGGcagcagagagggagaaagttAGGGAGCGCTACCTGGAGGAGCAGCAACTGCGGAGAGAGGGGGAGCAGGAGGCGGAGAGGCTGAGGGGGGCAGTAAAGGAGTGGGAGAGGCAGGCTGAGCGGCTGTCAGACACCCTGAAGGAAAGGGATGGTGAAGCGGTGGAGCTGAAGGAGAAGGCggaggagagcgagagagagcaggagaggctGTGGGCGCTGCTGcagcagagagacagggagataGAAAGATTGAGGGAGCGAGTTGAGGGACTGGAGAGGGCAGCAGAGGAGGGGGCCAGGCGGGAAACCATTCTGAGGGAGGAAAGGGAAGGGGAGAGGCGCCAACTGTGGGACACGCAGAGGAAAGAAGACGAGATGAGGGACAGAGAAATGCGACCCTTGAGGGATGCGGCAGAGAGAACGGCCAAGGCTGGGAGTAAAGCAGCAGAGCAGGAGCAAGAGGAGAAGCTGAGAAACGAGCTGAGGGCGAGAGACGGGGAGATTGTGCTGCTGATGGAGAGACTGGGGGCTCTGGAGAGGGAACGGGAAGACTTTCTCTCCAGCGCTGGAGCTGAGACCCAGACACTGGGGTGGCGGCTGTCCTCCTTGCTGGTGGAAAAGGAAGATGCCGTCCACACTCTGCAGCAGAGGGAGGTGGAGGTGCAAGTGCTGAAGGAGCGAGCTGAGGAGCTGGTGAGAGATCGAGCTCGGGTTCAGGGGGCCCTGGAGAGCACCGAGGCAGCTCTCATTGAGCAGCGGGAGCGGGTCAGAGAGCTGGAGCGAGGCATCAGGACTTGTCAGGAAGAGAGGGACATGGCAGTGTCTCGCCTCCTCAAGGCCGAGAAGGAGACTTCACCAGCACAGAGCGCAGGCATCCAGGAGAGGTTCAGCACCATGCACAGAGCCGTGGCACAGCTGGAGCATGACAAGCAACAGCTGGAAGCAGAGAAGAAACATCTGGAACGGCGCTCAGAGCGGCTGAGGATAGAGCGAGGACAGCTGAGGGAGACCCTGACTCAGGTAGAGGAGGAGCGGGTGAAACTGCGCCACCAGCTGTCCAATTCAGACTCCGCCTATAGGAGTCACAccaggtcaaagGCGGAGAGCAAAGAAGAGGTGGAGATGGAGAGGCTGAGAGCTCGGGTCAAGGAGCTGGAGGAACAGGTGCACTATCTCCGGCTCACGTTGGCCGTCGACTTCCGAGAAAGAGCGGAGTTCATCGAGCGCTCTTCCAGGAACAGCCAGTGGTTGCTGTCCCTGCGCCAGGACCTCTCCGATTCGCTGAGCCTGGTATCACAGAAGACACTCCCCTCGGTGCTGGAGGCCGAGACGCTGCGATTGGACAGGACCCTGAGGGAGGAGGAGCTGCGATTGTCTTTCAGCCAGTCATgaaaaaggaagggaaaaaaaagaccagaCACATTTAAATTTGCTTTTATGAAGGAAGAACAAAAGCTGATATTGTTCAACACTCGGGAAGGGTAACCCAGGGAGTTTCCTTATTGGTGTATCCCATTGTGCTTATCTCCTCTGTTGTAATTAATGCAATTGTTAATATTTTGCAGCCTCTCCAAGAAGTTTAAACCGAGGTCAAGaggaaatcatttaaaatggctCTAAGATACCCTGACAGAGTGGCactaaatcacaaattaaagaTACCAGGACGTTTTCCTGGCAGTGTGTGATCAGCTACCTTTGTTAGTAGAAAATTCTAATTATAAGGCCAGTATGCTGTAGTTATTTTAGGCTTAAGATAACATTAGGCATTGAGTGAGTGACTGGTGTTGAttggtaatttaaaaaaggagaatGGAGGTGGAACAAAATTCAGTTCCTTTTGCAGATGCATTGCAAAGAGTGAGGATTCTAACAGATAAGTGATGGTTTTTAACAGCCATTAGCCCTTAAAGGAAAATCTTTCATAAATTGATAGGATGTATATAAACTGCCATATTTTCtcttgtattaatattaatgtcaaatgtacagtttgtttatatttaaagctgtaacactaatttatatatatataaaatgtgtgtgtgt
>TU163895
TATTTTGCAGCCTCTCCAAGAAGTTTAAACCGAGGTCAAGaggaaatcatttaaaatggctCTAAGATACCCTGACAGAGTGGCactaaatcacaaattaaagaTACCAGGACGTTTTCCTGGCAGTGTGTGATCAGCTACCTTTGTTAGTAGAAAATTCTAATTATAAGGCCAGTATGCTGTAGTTATTTTAGGCTTAAGATAACATTAGGCATTGAGTGAGTGACTGGTGTTGAttggtaatttaaaaaaggagaatGGAGGTGGAACAAAATTCAGTTCCTTTTGCAGATGCATTGCAAAGAGTGAGGATTCTAACAGATAAGTGATGGTTTTTAACAGCCATTAGCCCTTAAAGGAAAATCTTTCATAAATTGATAGGATGTATATAAACTGCCATATTTTCtcttgtattaatattaatgtcaaatgtacagtttgtttatatttaaagctgtaacactaatttatatatatataaaatgtgtgt

Function

GO: NA

KEGG:

id description
K16464 CEP250, CNAP1; centrosomal protein CEP250

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001331 True 6762 mRNA 0.57 21 25423687 25450310
TU163895 False 490 lncRNA 0.33 1 25449817 25450306

Neighbor

gene id symbol gene type direction distance location
AMCG00001332 NA coding upstream 58391 25363893 ~ 25365296 (+)
AMCG00001328 NA coding upstream 120999 25299096 ~ 25302688 (+)
AMCG00001325 NA coding upstream 126829 25246376 ~ 25296858 (+)
AMCG00001330 NA coding upstream 258854 25150764 ~ 25164833 (+)
AMCG00001329 NA coding upstream 272931 25150297 ~ 25150756 (+)
AMCG00001334 NA coding downstream 102134 25552444 ~ 25581376 (+)
AMCG00001335 NA coding downstream 179737 25630047 ~ 25636339 (+)
AMCG00001333 NA coding downstream 213555 25663865 ~ 25673767 (+)
AMCG00001338 NA coding downstream 268594 25718904 ~ 25725679 (+)
AMCG00001348 als2,LOC106574246 coding downstream 571671 26021981 ~ 26069510 (+)
G130757 NA non-coding upstream 26053 25382179 ~ 25397634 (+)
G130715 NA non-coding upstream 177533 25221616 ~ 25246154 (+)
G130712 NA non-coding upstream 206637 25215938 ~ 25217050 (+)
G130711 NA non-coding upstream 207952 25215225 ~ 25215735 (+)
G130705 NA non-coding upstream 226696 25196382 ~ 25196991 (+)
G130773 NA non-coding downstream 206 25450516 ~ 25450858 (+)
G130789 NA non-coding downstream 132032 25582342 ~ 25582606 (+)
G130792 NA non-coding downstream 182924 25633234 ~ 25633576 (+)
G130817 NA non-coding downstream 224907 25675217 ~ 25675482 (+)
G130839 nol5,nop58,LOC106575044,LOC106594422 non-coding downstream 277543 25727853 ~ 25729837 (+)
AMCG00001315 NA other upstream 817215 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 969302 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 977454 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1738566 23565151 ~ 23685121 (+)
G130335 NA other upstream 2257031 23166263 ~ 23166656 (+)
AMCG00001337 sumo1 other downstream 285245 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1406289 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1454053 26904363 ~ 26954597 (+)

Expression


Co-expression Network