G130712


Basic Information

Item Value
gene id G130712
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25215938 ~ 25217050 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163815
GCTTTAtggtggactttattcaaatgatgatgcatttgtgaaaatagaaaaacaccGCCCCTCTTTACAAATACATGTCCTAGACATTTTCTggacaaaacagaaatgcaaatgtcaaaCACTATTGCAAATGGTCATGGTATATGGTCATGCTCTACCAACCTCTAACCTTCGACATCTGAAGCTCTGAACCTCTGAACACGCCCACAGGACTGCTATGAATACATATGACTATTGACTAAACACTTTACCGGGAAATAAaattagaagtggaggtgcactTTATAGATCGACAAGTGTAGGTCCGGTTGGCTAAATTTCATATACCGATCATGAACTCGGGTATAAGCTAACACACATTGCGTTGCTACAaagttgtggcaacattgtgtgttagaaCGCAAATATGCCAGCCCATGACAAATCACTTTTGACTTCAGATACAAAGTTTAACTCACATTAATTGCAcctattatgtgtgtgtgcgtgtgtgtgttccctgtacagtgtttacatatgtattaaacGTACTCACACACTAATTGCCTGAACTGTAACGTTTTAATGTTTGCAAACACTGTTAATTTACTTGTTTCCAATAACTCACTGACACATGTGCATGgcaattgctttaagaaacaccTAAAATAAGCTAAATTCGCTTTATAACCTTTGTGTTAACTATACCTGAAAAACCATATACAATAAACTCATTACCGTGGGATCAGTGCTATATAATTGGTGCAATTAATGCGAGATAAGATCTGTTTGCAGAGTCAAAAGTGATTTGCCATGAGGGCTGGCATTTTTGTGTTCTATATTAACAAGTATAGGTCTTGATTGCTATATGAAATTAGCCAATAAGTGAAGCGAGagtaacattcaaaataaacataattccAGGACCCGTGTGATTTCCGGGTCTGCATCAATACTTACACTTGAAATCGAGCGCTTCTCTCATGAACAGAAAGCACAGAGCACATATTTATCAAAATACCTTTGATTTTGTATAGACTTGTAGAGAATACTTAATGCACAAATGTGCTGTCCAACCAGCTTTTAAGCGTTTAAAAGATCTATTAGctggcttttgagagtcagcatTTTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163815 True 1113 lncRNA 0.37 1 25215938 25217050

Neighbor

gene id symbol gene type direction distance location
AMCG00001330 NA coding upstream 51105 25150764 ~ 25164833 (+)
AMCG00001329 NA coding upstream 65182 25150297 ~ 25150756 (+)
AMCG00001324 NA coding upstream 69882 25119636 ~ 25146056 (+)
AMCG00001322 NA coding upstream 171126 25029903 ~ 25044812 (+)
AMCG00001319 NA coding upstream 354233 24702643 ~ 24861705 (+)
AMCG00001325 NA coding downstream 29326 25246376 ~ 25296858 (+)
AMCG00001328 NA coding downstream 82046 25299096 ~ 25302688 (+)
AMCG00001332 NA coding downstream 146843 25363893 ~ 25365296 (+)
AMCG00001334 NA coding downstream 335394 25552444 ~ 25581376 (+)
AMCG00001335 NA coding downstream 412997 25630047 ~ 25636339 (+)
G130711 NA non-coding upstream 203 25215225 ~ 25215735 (+)
G130705 NA non-coding upstream 18947 25196382 ~ 25196991 (+)
G130695 NA non-coding upstream 89859 25123594 ~ 25126079 (+)
G130692 NA non-coding upstream 129040 25086661 ~ 25086898 (+)
G130689 NA non-coding upstream 158960 25056621 ~ 25056978 (+)
G130715 NA non-coding downstream 4566 25221616 ~ 25246154 (+)
G130757 NA non-coding downstream 165129 25382179 ~ 25397634 (+)
G130773 NA non-coding downstream 233466 25450516 ~ 25450858 (+)
G130789 NA non-coding downstream 365292 25582342 ~ 25582606 (+)
G130792 NA non-coding downstream 416184 25633234 ~ 25633576 (+)
AMCG00001315 NA other upstream 609466 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 761553 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 769705 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1530817 23565151 ~ 23685121 (+)
G130335 NA other upstream 2049282 23166263 ~ 23166656 (+)
AMCG00001331 NA other downstream 206637 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 518505 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1639549 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1687313 26904363 ~ 26954597 (+)

Expression


Co-expression Network