AMCG00001328


Basic Information

Item Value
gene id AMCG00001328
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25299096 ~ 25302688 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001328
ATGTTGGATTTTGggtgcatttttatattaaacattattttatccTGTATAGGTACTAGCGGATGGGCGAAGCTCAGGAACACATACAAGAGTGAACTGTGTGATTCTAACATCGGCCAGTATGTTACCACTTACCTCAATGAGTATCTTGATGCAGAGGGTataacatttcagagttatgATCTCTCGTCAAGCATTGACATAACAGAGTGCTTTACTGTGGGAGATGAAAATGGGGAGCTCTTACTTGATTTTCTCACACAAGTATCTGACTTCAGTAAAATGGCACCAGAGGATCTTAAAGCTGGAGTGATGGACTTACTCCATCACCCTGAGTGTAGCAAAGAGATCGATGGCAGAATTATGTTCAACAGTACAATGGTTGTTGTGTCTTGGATTGGTGACTCGGTCAAAGACTTGGACTCGGACTCGACCTTCCGGGACTTGGACTCAGCCTTTTCCTTGCCTTGGACTGGAAACATTATTGATGAACAAGCAGAAAGATGGATGGACCTGCAAAGTAAGAGATCTGCAGAAGAGAAGCTGAGGAAAGCACTGAAGGAGGAGAGCAACCAG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001328 True 576 mRNA 0.43 3 25299096 25302688

Neighbor

gene id symbol gene type direction distance location
AMCG00001325 NA coding upstream 2238 25246376 ~ 25296858 (+)
AMCG00001330 NA coding upstream 134263 25150764 ~ 25164833 (+)
AMCG00001329 NA coding upstream 148340 25150297 ~ 25150756 (+)
AMCG00001324 NA coding upstream 153040 25119636 ~ 25146056 (+)
AMCG00001322 NA coding upstream 254284 25029903 ~ 25044812 (+)
AMCG00001332 NA coding downstream 61205 25363893 ~ 25365296 (+)
AMCG00001334 NA coding downstream 249756 25552444 ~ 25581376 (+)
AMCG00001335 NA coding downstream 327359 25630047 ~ 25636339 (+)
AMCG00001333 NA coding downstream 361177 25663865 ~ 25673767 (+)
AMCG00001338 NA coding downstream 416216 25718904 ~ 25725679 (+)
G130715 NA non-coding upstream 52942 25221616 ~ 25246154 (+)
G130712 NA non-coding upstream 82046 25215938 ~ 25217050 (+)
G130711 NA non-coding upstream 83361 25215225 ~ 25215735 (+)
G130705 NA non-coding upstream 102105 25196382 ~ 25196991 (+)
G130695 NA non-coding upstream 173017 25123594 ~ 25126079 (+)
G130757 NA non-coding downstream 79491 25382179 ~ 25397634 (+)
G130773 NA non-coding downstream 147828 25450516 ~ 25450858 (+)
G130789 NA non-coding downstream 279654 25582342 ~ 25582606 (+)
G130792 NA non-coding downstream 330546 25633234 ~ 25633576 (+)
G130817 NA non-coding downstream 372529 25675217 ~ 25675482 (+)
AMCG00001315 NA other upstream 692624 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 844711 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 852863 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1613975 23565151 ~ 23685121 (+)
G130335 NA other upstream 2132440 23166263 ~ 23166656 (+)
AMCG00001331 NA other downstream 120999 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 432867 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1553911 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1601675 26904363 ~ 26954597 (+)

Expression


Co-expression Network