G125612


Basic Information

Item Value
gene id G125612
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 575290 ~ 575492 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157439
CCACACGCCGCTCAGTCCTACCTTGGCGATCTGGACACACCAGTTGAGCAGCAGCTGGGAGCCGATGTTGTCCTTGTGCTCGTGCACGTAGTCCAGCAGGCAGCCGTGGGGCATCAGCTGCGTCACCAGCTGGATGGTGGGGCTGAGACACACGCCTAGCAGCCGGACCAGGTGGGGGTGCTCCATGCTGGCCATGATCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157439 True 203 lncRNA 0.64 1 575290 575492

Neighbor

gene id symbol gene type direction distance location
AMCG00000695 cps1 coding upstream 160495 414444 ~ 414795 (+)
AMCG00000694 NA coding upstream 160862 367576 ~ 414428 (+)
AMCG00000683 unc80 coding upstream 431395 138105 ~ 143895 (+)
AMCG00000681 NA coding upstream 534694 38752 ~ 40596 (+)
AMCG00000680 NA coding upstream 549009 21907 ~ 26281 (+)
AMCG00000702 vwc2l coding downstream 536389 1111881 ~ 1133185 (+)
AMCG00000705 NA coding downstream 650825 1226317 ~ 1233934 (+)
AMCG00000708 NA coding downstream 673249 1248741 ~ 1249425 (+)
AMCG00000704 NA coding downstream 681289 1256781 ~ 1272965 (+)
AMCG00000715 NA coding downstream 819904 1395396 ~ 1395970 (+)
G125605 erbb4,LOC107555909,LOC107741926,LOC107662043,LOC107721020,LOC107660610 non-coding upstream 43378 529899 ~ 531912 (+)
G125597 NA non-coding upstream 88087 456502 ~ 487203 (+)
G125565 NA non-coding upstream 219561 354488 ~ 355729 (+)
G125516 NA non-coding upstream 446163 128859 ~ 129127 (+)
G125510 pofut2 non-coding upstream 457988 116111 ~ 117302 (+)
G125613 NA non-coding downstream 21295 596787 ~ 597135 (+)
G125684 myo1b non-coding downstream 728603 1304095 ~ 1307335 (+)
G125713 NA non-coding downstream 748011 1323503 ~ 1328639 (+)
G125736 NA non-coding downstream 851141 1426633 ~ 1426943 (+)
G125767 NA non-coding downstream 1019331 1594823 ~ 1609210 (+)
G125561 NA other upstream 171699 339640 ~ 403591 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other downstream 1024204 1599696 ~ 1606031 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other downstream 1093353 1668845 ~ 1698573 (+)
AMCG00000734 NA other downstream 1229915 1805407 ~ 1814157 (+)
AMCG00000848 NA other downstream 4885809 5461301 ~ 5465981 (+)
G127134 NA other downstream 8041707 8617199 ~ 8620195 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000083 ERBB4 coding NC_007112.7 CM002885.2 7189856 ~ 7448795 (+)