AMCG00014420


Basic Information

Item Value
gene id AMCG00014420
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13450098 ~ 13451219 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014420
ATGGATTATTtaccctctctcctcctcctgctggtCTCAGTACAAGGTACTTATTCTTACAACCCTATCTGGAAGCCCTTGTGGTCCACAGCCAAACTGCCAGTGGTCCTGCCTCAGCTAACAGAGGACTTGGACCCTCCACAGTTTAATGCCGAAGCCAAACTTGAGGTGATTTCACCATGTGGGCCGGAGTGTCACAAGCAGGCTCCAATACCAAGCTATGAGGACCTAAAAGATTTCCTCTCTTACGAGACTCTCTACTTCAATGGGAGCCTTACGGAAACCAAGGTAGGCATCTATGGCTTTCACTTAGCAAATTTGGCCCAAGGGGCCAGAGGGCGTTCCAGGGCCAAGAGACAAATCTATGGACATGACAGCAGGTTCAGTATTTTTGGGAAGGACTTCTTGTTGAATTATCCCTTCTCCACGTCGGTGAAGGTCTCCACTGGTTGCACAGGGACACTGGTGGCTGAGAAGCATGTCCTGACAGCCGCCCACTGCATTCACGATGGGAAGAGCTACGTGAAAGGTGCGCAGAAGATGAAGGTTGGCTTCCTGAAGcccagacagaaagagacagccGACACTAACAAGACCAGCTCTCGTCAGCCAGAGAAGATGAAGTTCCAGTGGATTCGGGTCAAGCGTACTCATGTTCCCAAGGGCTGGATCAAAGGCAATGCCAATGATATCGGAATGGATTATGACTACGCCCTGCTGGAACTCAAGAAGGCCCACAAGCGGCGGTACATGAAGATCGGAGTGAGCCCCTCAGCCAGCCAGCTGCCAGGCAAGAGGATCCATTTCTCAGGCTTTGACAATGACCGTCCAGGGAACCTTGTGTACCGCTTCTGCGAGGTGCGGGAGGAGACCTATGACCTGCTGTACCAGCACTGCGACGCCCAGCCAGGGGCCAGCGGTTCCGGGGTCTATGCACGCATTTGGAACCGCCAGCACCGCCGCTGGGAGCGCAAGATCATGGGCATCTTCTCAGGGCACCAGTGGGTCGACCAAAACGGCTCCCCCCAGGAGTTCAATGTCGCCGTGCGCATCACACCCCTGAAATACGCCCAGATCTGCTACTGGATCAAGGGAAATTATGTGGATTGCCGGGAtggataa

Function

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K09627 PRSS23; serine protease 23

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014420 True 1122 mRNA 0.54 1 13450098 13451219

Neighbor

gene id symbol gene type direction distance location
AMCG00014418 NA coding upstream 78722 13361748 ~ 13371376 (+)
AMCG00014419 NA coding upstream 90078 13340187 ~ 13360020 (+)
AMCG00014415 eed coding upstream 119008 13323367 ~ 13331090 (+)
AMCG00014416 NA coding upstream 148225 13291329 ~ 13301873 (+)
AMCG00014417 NA coding upstream 165804 13276573 ~ 13284294 (+)
AMCG00014422 NA coding downstream 139701 13590920 ~ 13615018 (+)
AMCG00014421 NA coding downstream 179448 13630667 ~ 13650074 (+)
AMCG00014424 NA coding downstream 292902 13744121 ~ 13747498 (+)
AMCG00014426 NA coding downstream 298454 13749673 ~ 13788076 (+)
AMCG00014425 cul4a,LOC102780633 coding downstream 339930 13791149 ~ 13813879 (+)
G69961 NA non-coding upstream 69694 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 114913 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 467664 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 849785 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1666015 11783865 ~ 11784083 (+)
G70054 NA non-coding downstream 243596 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 716227 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 1015485 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1728626 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1899423 15350642 ~ 15430852 (+)
AMCG00014407 LOC107725344 other upstream 198366 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3298185 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3441450 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5967538 7464503 ~ 7482560 (+)
G68848 NA other upstream 6033504 7413640 ~ 7416594 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 204019 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 738345 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 851228 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1770695 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 2224412 15675631 ~ 15685899 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_06476844_06477950 PRS23, PRSS23 coding CI01000299 null 6475983 ~ 6479549 (-)