AMCG00014695 (myh9,LOC103376082,LOC106601336,LOC100380669)


Basic Information

Item Value
gene id AMCG00014695
gene name myh9,LOC103376082,LOC106601336,LOC100380669
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27420051 ~ 27421669 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014695
ATGGTACAGCGAGACGAGGACAAGTTCCTGAAAGTGGACCACAACCTGATCAGCTGCCCGCTGGTGCAGGCCAGCTGGGCCGCCAAGAAGCTGGTGTGGGTGGCATCACAACACAATGGGTTCGAGGCGGGGAGAGTGCTGGAGGAGCGGGGCGAGGAGGCCGTGGTGGTGTTGGTGGCGAGCGGCAGGAAGGTGTGCGTCAACAAGGACAGCATCCAGAAGATGAACCCGCCCAAGTTCACCAAGGTGGAAGACATGGCCGAGCTGCCCTGTCTGAACGAGGCCTCTGTCCTGCACAACCTGAAGGAGCGCTACAACTCTGGCCTCATCTATacgTACTCTGGACTGTTCTGTGTGGTGATCAACCCCTATAAGACCCTGCCGATCTATTCTGCGGACATGGTGGAGATGTATAAGGGCAAGAAGAGACACGATGTGCCCCCCCACATCTATGCCATCACCGACACGGCCTACTGCAGCATGGTGCAGGatcGCAAGAACCAGTCCATCCTGTGCACAGGGGAGTCTGGCGCGGGGAAGACAGAGAACACCAAGAAAGTGATACAGTACCTGACTCACATCGCCTCCTCTCCCAAGACCAAGAAAGACCAAGGGGAGCTGGAGAGGCAGCTGCTGCAGGCCAACCCCATCCTGGAGGCGTTCGGCAATGCCAAGACTGGGAAGAACGACAACTCTTCCCGCTTCGGGAAGTTCATCAGGATCAACTTTGATGTGAACGGCTACATCGTGGGAGCCAACATCGAGACCTGTATCCTTTCTGTCACAGCACAGTAA

Function

symbol description
myh9 Enables several functions, including adenyl ribonucleotide binding activity; integrin binding activity; and protein homodimerization activity. Contributes to actin filament binding activity and microfilament motor activity. Involved in several processes, including actin cytoskeleton organization; myeloid cell differentiation; and negative regulation of actin filament severing. Acts upstream of or within actin filament-based movement. Located in several cellular components, including actin cytoskeleton; immunological synapse; and myosin II filament. Part of myosin II complex. Colocalizes with COP9 signalosome. Implicated in several diseases, including auditory system disease (multiple); autosomal dominant Alport syndrome; blood platelet disease (multiple); end stage renal disease; and orofacial cleft. Biomarker of MYH-9 related disease.

NR:

description
PREDICTED: myosin-9-like isoform X2

GO:

id name namespace
GO:0032836 glomerular basement membrane development biological_process
GO:0072104 glomerular capillary formation biological_process
GO:0072015 glomerular visceral epithelial cell development biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014695 True 795 mRNA 0.57 5 27420051 27421669

Neighbor

gene id symbol gene type direction distance location
AMCG00014698 NA coding downstream 15132 27397227 ~ 27404919 (-)
AMCG00014699 NA coding downstream 33424 27381186 ~ 27386627 (-)
AMCG00014700 NA coding downstream 42279 27373072 ~ 27377772 (-)
AMCG00014689 shox,LOC102229599 coding downstream 230533 27179103 ~ 27189518 (-)
AMCG00014688 NA coding downstream 386032 26980121 ~ 27034019 (-)
AMCG00014694 NA coding upstream 9582 27431251 ~ 27440929 (-)
AMCG00014696 NA coding upstream 19684 27441353 ~ 27466854 (-)
AMCG00014697 atg3,LOC107752093,LOC107659953 coding upstream 48620 27470289 ~ 27482680 (-)
AMCG00014702 ccdc80,LOC107695464,LOC107756780,LOC107673676,LOC107748150 coding upstream 70359 27492028 ~ 27509142 (-)
AMCG00014707 kdm6a coding upstream 296297 27717966 ~ 27762413 (-)
G72049 NA non-coding downstream 1006 27418816 ~ 27419045 (-)
G71961 NA non-coding downstream 487414 26932268 ~ 26932637 (-)
G71882 NA non-coding downstream 1085051 26334655 ~ 26335000 (-)
G71880 NA non-coding downstream 1095797 26324038 ~ 26324254 (-)
G71879 NA non-coding downstream 1138086 26281374 ~ 26281965 (-)
G72089 NA non-coding upstream 108627 27530296 ~ 27530643 (-)
G72139 NA non-coding upstream 414670 27836339 ~ 27837927 (-)
G72146 NA non-coding upstream 435070 27856739 ~ 27861375 (-)
G72280 NA non-coding upstream 1156740 28578409 ~ 28578734 (-)
G72305 LOC100136012 non-coding upstream 1224826 28646495 ~ 28646811 (-)
AMCG00014692 LOC107756725 other downstream 50524 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 115454 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 5175136 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 8194821 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 8216484 19201803 ~ 19203567 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 908070 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 1967621 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 3419854 30841523 ~ 30846800 (-)
G73047 NA other upstream 4841498 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 5033637 32455306 ~ 32555945 (-)

Expression


Co-expression Network