Gene
RNA
| Item | Value |
|---|---|
| gene id | G71540 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 22984149 ~ 22984567 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU89445 | True | 419 | lncRNA | 0.53 | 1 | 22984149 | 22984567 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014631 | NA | coding | downstream | 651339 | 22320028 ~ 22332810 (-) |
| AMCG00014628 | NA | coding | downstream | 858783 | 22119740 ~ 22125366 (-) |
| AMCG00014629 | pou4f1 | coding | downstream | 870518 | 22112182 ~ 22113631 (-) |
| AMCG00014627 | pcdh9 | coding | downstream | 1204648 | 21776406 ~ 21779501 (-) |
| AMCG00014626 | NA | coding | downstream | 1356259 | 21620825 ~ 21627890 (-) |
| AMCG00014633 | NA | coding | upstream | 619042 | 23603609 ~ 23604731 (-) |
| AMCG00014634 | NA | coding | upstream | 780511 | 23765078 ~ 24324642 (-) |
| AMCG00014639 | NA | coding | upstream | 1915524 | 24900091 ~ 24910282 (-) |
| AMCG00014640 | NA | coding | upstream | 1929736 | 24914303 ~ 24927812 (-) |
| AMCG00014641 | sox21 | coding | upstream | 1976379 | 24960946 ~ 24961689 (-) |
| G71539 | NA | non-coding | downstream | 22079 | 22961869 ~ 22962070 (-) |
| G71526 | NA | non-coding | downstream | 128530 | 22855349 ~ 22855619 (-) |
| G71512 | NA | non-coding | downstream | 426486 | 22557383 ~ 22557663 (-) |
| G71496 | LOC100846954 | non-coding | downstream | 677202 | 22306634 ~ 22306947 (-) |
| G71461 | NA | non-coding | downstream | 762682 | 22221070 ~ 22221467 (-) |
| G71561 | LOC107575789 | non-coding | upstream | 428049 | 23412616 ~ 23412984 (-) |
| G71582 | NA | non-coding | upstream | 720632 | 23705199 ~ 23705420 (-) |
| G71583 | NA | non-coding | upstream | 720999 | 23705566 ~ 23705866 (-) |
| G71591 | NA | non-coding | upstream | 1095981 | 24080548 ~ 24080747 (-) |
| G71593 | NA | non-coding | upstream | 1171163 | 24155730 ~ 24156148 (-) |
| AMCG00014630 | LOC107672672 | other | downstream | 739234 | 22225924 ~ 22244915 (-) |
| AMCG00014603 | tpt1,LOC106582181 | other | downstream | 3758919 | 19217722 ~ 19225230 (-) |
| AMCG00014604 | kctd4,LOC107688678,LOC107748885 | other | downstream | 3780582 | 19201803 ~ 19203567 (-) |
| AMCG00014567 | mzt1,si:dkey-15d12.2 | other | downstream | 4962054 | 17990651 ~ 18022095 (-) |
| AMCG00014559 | NA | other | downstream | 5362998 | 17589267 ~ 17621151 (-) |
| AMCG00014693 | NA | other | upstream | 4300853 | 27285420 ~ 27304597 (-) |
| AMCG00014692 | LOC107756725 | other | upstream | 4351128 | 27335695 ~ 27369527 (-) |
| G72236 | rpl8,LOC107595836,LOC107748161 | other | upstream | 5345172 | 28329739 ~ 28332482 (-) |
| G72477 | LOC106598269,LOC101158751,LOC106586690,LOC103361283 | other | upstream | 6404723 | 29389290 ~ 29398305 (-) |
| AMCG00014775 | NA | other | upstream | 7856956 | 30841523 ~ 30846800 (-) |
