AMCG00021067


Basic Information

Item Value
gene id AMCG00021067
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 1926713 ~ 1927858 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021067
ATGGTACTCAGAACGCCAGTCATGATGAGTTTAGTGGACATTTCCAAGATGTTTTCCATGCTGCAGcccagagaggaggaggacgacgGCGAGAGACAAGAGCTGCACCAGGCGGTGTCCAACGATGACGACGGGCTCCTCGCAGAGCTGCTCTCCCAGGACAGATACCGGCGGTTCATCGACAGCAGGAGCGGCTGGGGAGTCCCGGGCACCCCCCTGCGCATGGCGGCGTCACGGGGCCACCTCCGGTGCCTAGAGGTGCTGCTGGCCCGCGGGGCGGAGGTGGACAGCCTGGACGTCAAGGCCCAGACGCCCCTCTTCACCGCCGTCAGCGGGAAGCACCTGGACTGCGTCCTCGCCCTCCTCAAGGCCGGAGCGAACCCCAACGGCAGCATCTACAACAACTGCTCCCCGGTGCTCACTGCGGCCCGGGAGGGCGATGTGGACATCCTGAGGGAGCTGCTGCGGCACGGGGCCGAGGTCAACGCCCGCTCCAAGGTCCCCGAGTGGGCTGCCAATGCCACGGCCTGCGGGGGACCTCTTTATCTCTCCGCCGTCTATGGACACCTGGACTGCTTTAAGTTGCTTCTCCTGCACGGAGCAGATCCGAACTACAACTGCACAGAAGAGAAGCTCCTGGCCCGGATCAAGCAGCCCAAGACGGTGCTGGAGATGTGCCTCCGGCACGGCTGTGGGGTCGAGTACATCCAGCTGCTCATCGACTTTGGAGCGAATGTCTACCTGCCCACAATCATCATCGAGAAGACCACCAAGCAGAATGAGGCGGTGGAGCTGATAATCAAAGAAAGAGTTTGTCCCAAAACGCTGATGTCTCAGTCACGCCTTGCAATTCGAAGTTTCCTCCAAACGGCCAACAACACGCATTCCATCGACCGCCTGGACATCCCGCCCATCCTGAGGAACTATTTGAAACACACGACTTGA

Function

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process

KEGG:

id description
K10334 ASB12; ankyrin repeat and SOCS box protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021067 True 945 mRNA 0.61 2 1926713 1927858

Neighbor

gene id symbol gene type direction distance location
AMCG00021066 NA coding downstream 2170 1919383 ~ 1924543 (-)
AMCG00021064 NA coding downstream 8889 1905068 ~ 1917824 (-)
AMCG00021061 NA coding downstream 74169 1842621 ~ 1852544 (-)
AMCG00021060 arhgef9 coding downstream 136176 1755516 ~ 1790537 (-)
AMCG00021059 LOC106567799,LOC105028962,LOC106603320,LOC103034185 coding downstream 234098 1673885 ~ 1692615 (-)
AMCG00021065 LOC106603315 coding upstream 3700 1931558 ~ 1952876 (-)
AMCG00021069 NA coding upstream 41392 1969250 ~ 1973537 (-)
AMCG00021068 NA coding upstream 45927 1973785 ~ 1974108 (-)
AMCG00021072 zc4h2,LOC107557113,LOC107597258,LOC107663226,LOC107672730 coding upstream 121338 2049196 ~ 2057385 (-)
AMCG00021075 NA coding upstream 158768 2086626 ~ 2106886 (-)
G83294 NA non-coding downstream 61486 1854882 ~ 1865227 (-)
G83205 NA non-coding downstream 1000149 922859 ~ 926564 (-)
G83091 NA non-coding downstream 1841586 84874 ~ 85127 (-)
G83081 NA non-coding downstream 1889822 36247 ~ 36891 (-)
G83342 zc3h12b non-coding upstream 151811 2079669 ~ 2080014 (-)
G83343 NA non-coding upstream 155319 2083177 ~ 2086079 (-)
G83346 NA non-coding upstream 177206 2105064 ~ 2106398 (-)
G83352 msn,LOC106567791,LOC102776036 non-coding upstream 212432 2140290 ~ 2141743 (-)
G83355 NA non-coding upstream 216546 2144404 ~ 2147117 (-)
G83313 NA other upstream 45302 1973160 ~ 1977968 (-)
G83428 NA other upstream 529143 2457001 ~ 2459379 (-)
AMCG00021090 NA other upstream 749727 2677585 ~ 2718919 (-)
G83761 NA other upstream 2775397 4703255 ~ 4751235 (-)
G83864 NA other upstream 4616634 6544492 ~ 6546577 (-)

Expression


Co-expression Network