G83313


Basic Information

Item Value
gene id G83313
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 1973160 ~ 1977968 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU103965
NNNCAAGCCTATTCAGCAAATCCCCGTCTAATAAAGACCTGCCTGGCGCGCCGATCCCTTGCAGAGGAGCTCTCCCCACCTGGCTCTCCCATCGCAGCCCCTGTGCAGCTGAACcctgttggatttaacatgtaaGACTCGACGCGGCGCACGGCTGCGGGCTCAGCAGCTCAGGTAATTCCACCGGCTTTGAGCTTAAAAAGTCGACTGAAGCGGCTCCTCATTTGGGAAGGGAACCGGCGGCCGCctggaaagggagagagagaataaataagaAGAGGAGAGAGCAATCCCAGAGGCACGGCATCCTGCCCGCTCAGCAAAAACGAGAGAGAATCAAccgcaaaaatatatatataagaaaacacaaaaataaagtgagCTTCCTCCTAATATAAGAGCGGTGACTCCGGGCTGCTTTTATTACTCGGGATTTAATAATAAAGAGCTGGGGAGCTGCCAACCAACTCGAGCGAAAATCTCATTCAAGGTTCATTCTGGAAGGTGCCACAGTTTCATTCGgctgcaggaaaaaaatattgtaagaAACCTGTTTATCTGCGACAAGATGGCAGGATTTCAAGGCACAGGGTTGAAATGACTCGGAAAGGGCGGCTGCATCAGTAAAGAACGGCCCACGGGTCGACCGCCGCTGCCAGCCAGTCCAGGGGCACATGGGAATGCTCAGTGACTTCCTCGCCACCAGCCCCCCGTGTATCTGCAAGAATCCGCGAGTCGAGGGGCAATAAGGTTCGGATGTGAGGTGCGCCATGTAAACTGTAAAACCTTTCTGGCTTTTCTGGAACGTGTGGCGCGGCTCAATGAGGCCCAGAGTCCCGGGGAGCTCCCTGTCCGTGCCGCTGGAGATGGGCGACGCTCACCCCGGCGTCTCCGCGGCCAACTACACCCAGGACGTGGCGGCGCCGAGACACGCGGACGACTCCCTCTCCTCCATCATCGCCCTGATGGTGGTGCTGGCTCTGGCCTGCGCCGTGATCGTGACCTCTCTGGTGACTTTCTACTGCcacaagctgcagctgcaggggaAGAAGCTGAGGAAGGCCCAGGAGGAGTACGAGCGAGACCACGGCCAGAGCAACCCACAGCCCAGCAGGGAGCCGACCGATGGGCTTCAGAGCCCTTAGGGGACCCAGCGGCCGATGTGCCGAGCAGTATCTTTTCAACTGCTTATTTACAGATGTCTTCAGGGGACTCGCGTCCGGTGAAACACACAGGCGCTCGTTTCCAGGAGAGGTTCTATTTTCCAGGATCTCACGATGactctatttttaaaaacaaacatgtaaagcGCCGGCCTGTGGAGCAGGGAGCGCTCCGGCCGGGAGGGAATCGCGTTCTCGTTTTCTACGGCCGTGTAGTTTCGGTGACTGGATGTGCCGCTGCTCCGTCTTCGAGACATCGGAAGTGAGGCACAGCGgccgggggaggggggtgtttaTCCTTTTCGGTGGTAGCTTTTGTGTTACATGTCTGCTCTGTGTAGAGAAATAAACTGCAACAACAATATCCTAATGGCTCAGTGAAAACATGGCAGTGTCTAGTTTAGAGGTATTGTGAACCATGCCTACAGTACCTATATTTAGCCTTCATTTATAACATTACCAGACAATATTCTTAATTATTCTATGTTATACTCGGTTCTTCGATTATAAGAGGGTTTCTTTGTAAGGATCATGTATGTTAAGTACTATTAATACTCTCAATTTTGCAACCATGTACCAATACAATAAAGGTATCGACTCTTTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103965 True 1770 TUCP 0.52 2 1973160 1977968

Neighbor

gene id symbol gene type direction distance location
AMCG00021065 LOC106603315 coding downstream 20284 1931558 ~ 1952876 (-)
AMCG00021067 NA coding downstream 45302 1926713 ~ 1927858 (-)
AMCG00021066 NA coding downstream 48617 1919383 ~ 1924543 (-)
AMCG00021064 NA coding downstream 55336 1905068 ~ 1917824 (-)
AMCG00021061 NA coding downstream 120616 1842621 ~ 1852544 (-)
AMCG00021072 zc4h2,LOC107557113,LOC107597258,LOC107663226,LOC107672730 coding upstream 71228 2049196 ~ 2057385 (-)
AMCG00021075 NA coding upstream 108658 2086626 ~ 2106886 (-)
AMCG00021078 NA coding upstream 179681 2157649 ~ 2176534 (-)
AMCG00021077 NA coding upstream 252540 2230508 ~ 2245691 (-)
AMCG00021082 NA coding upstream 424206 2402174 ~ 2412334 (-)
G83294 NA non-coding downstream 107933 1854882 ~ 1865227 (-)
G83205 NA non-coding downstream 1046596 922859 ~ 926564 (-)
G83091 NA non-coding downstream 1888033 84874 ~ 85127 (-)
G83081 NA non-coding downstream 1936269 36247 ~ 36891 (-)
G83342 zc3h12b non-coding upstream 101701 2079669 ~ 2080014 (-)
G83343 NA non-coding upstream 105209 2083177 ~ 2086079 (-)
G83346 NA non-coding upstream 127096 2105064 ~ 2106398 (-)
G83352 msn,LOC106567791,LOC102776036 non-coding upstream 162322 2140290 ~ 2141743 (-)
G83355 NA non-coding upstream 166436 2144404 ~ 2147117 (-)
G83428 NA other upstream 479033 2457001 ~ 2459379 (-)
AMCG00021090 NA other upstream 699617 2677585 ~ 2718919 (-)
G83761 NA other upstream 2725287 4703255 ~ 4751235 (-)
G83864 NA other upstream 4566524 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 5137452 7115420 ~ 7122491 (-)

Expression


Co-expression Network