AMCG00021108 (nono)


Basic Information

Item Value
gene id AMCG00021108
gene name nono
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 3804211 ~ 3809015 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021108
atcaaaatgaaaatggaccaaaacaatacatgcatttttaaatttattctCACACAAACTTGACGCACGACTTCCGCTCACAGGCCTACCGAACCCGGCGGCGTCCTTTTTAAAACGGGTTTTCACCAATGGGCTGCAGCTTGGGGGCGGTCGCGGCGCCTCAGGCTGTGAGTGACAAGGCTTTCTCCAATTAGAACCGAGATGTGGTATGATTGACAGTCTCACGGACCAATAAGCGAGCACCAGTGGATCCAAGCGAACGAATCAGCAACGGAGAACACTGTCTCTTCCGCCCGACGGCCGAGTGCAGTTGTGCAAGAAGACGGCGGGCACGCTTTCCTTTCTTCTCGCCTGGCTGTGCGCACAAGGCCGGCCTCTCCTCCGCGCAGCGTCTCTCTCCGCGGGGACTGATCTCCTGCTCTCCCGCCTCCAGGATGCAAGGCAACAGAGGGCCCCGTCCCGACCAGCAGAACCACGGACCCCTGAGACCCCCACACATGCATGAGCACCAGAAACAGGGGCCCAACGCCAACAGCAATGGACAGCACGCCGAGACCAGTGACCAGAAAAACTCCGGGCTGACGATCGATCTGCAGAACTTCAGGAAGCCCGGGGAGAAGGTGTACACCCAGCGCAGCCGACTGTTCGTGGGGAACCTGCCGGCTGGCGTGACCGAAGAGGAGATCGAGAAACTCTTCTCAAAGTATGGGAAGCCATCGGAGATCTTCATCAACAAGGAGCGCAGCTTTGGCTTTATCAGACTGGAAACCAAAACCATGGCTGAGATCGCCAAAGCCGAGCTGGACGACACCCCGTTCAGAGGCCGGCAGCTGCGCGTCCGGTTCGCCACCCACGGAGCCGCCCTCACGGTCAAGAACCTGCCCCAGTTCATCTCCAACGAGCTGCTCGAGGAGGCCTTCTCGATATTTGGCCAGGTGGAGAGGGCCATCGTGATCGTGGATGACCGGGGAAGGCCAACTGGAAAGGGCATCGTGGAATTCACTGCCAAGCCTGCGGCCCGGAAAGCCCTGGACAGATGTGCTGACGGTGCCTTCCTGTTGACTGCCTTCCCCAGACCTGTGACTGTGGAGCCGATGGAGCAGTGTGATGAAGATGAGGGTCTGCCCGAAAAAGTGATCAATAAAAACCAGCATTTCCACAAGGAGAGGGAGCAGCCCCCGCGCTTTGCCCAGCCTGGCACCTTCGAGTACGAGTACGCCATGCGCTGGAAGGCCCTGATCGACATGGAGAAGCAGCAGTACGAGCAGGTGGAGAGGAACATCAAAGACGCCAAGGAGAAACTGGAGGCCGAGATGGAGGCGGCACGCCACGAGCACCAGGTCATGATGATGCGGCAAGGTGGGTCAGCCTGTGCATCCGAGAGCAGCATTGAGAGACCTGGGCTTCGGGGGTCCCCGGCCCTCGACGTTGGTTCCCGCGTGAGACCACGTGTTTCTCTCCTCCCCGCAGACCTGATCCGGCGCCAGGAGGAGCTGCGCAGGATGGAGGAGCTGCACAACCAGGAGCTGCAGAAGCGCAAGCAGATGGAGCTGCGCCAGGAGGAGGAGCGGCGCCGGCGGGAGGACGACATGAGGATGCAGCACGAGGACATGATGAGACGGCAGCAGGAGGGCTTCAAGGGCAGCTTCCCTGAGAGCaGAGAGCAGGAGATCCGGATGCACATGGCAGGACAAGGCATGGGGATGAACAGGAATGCGATCGGCGGGAACGCGGCGCCACCTGGAGCTCCCAACATCCCCCCCGAAGGAGCGCCGCTCATGGTAATGTCACAGTCTCCGCAATCCTCCATAAGCCAGACGTTTGAATCGCTTTGCAGCATCGTCGAAGAAAATGAGTTGAAGATCTCAAAGTTCTGTAAAACGAGAGGAAAGCGCAACGCAGCGCTGCAGTTGTTCATTGGTGACGCTTATGTTCAGAGAATTACAAGACGTGGGACTGTGCAGCACAATGAGCGCTTCCCTATGGGCGGCCCCATGGAGGCGGCGGGCAACAGCGCCCTCCCCGGAGCACCAGGCGGGTTCCCCCGAGGACCCCCGGGCGGTGCCGACTACGGCCCCAACAAGCGCCGAAAGTATTGA

Function

symbol description
nono Predicted to enable RNA binding activity. Acts upstream of or within central nervous system development; otic vesicle development; and somite development. Predicted to be located in nuclear speck. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability 34. Orthologous to human NONO (non-POU domain containing octamer binding).

NR:

description
PREDICTED: non-POU domain-containing octamer-binding protein

GO: NA

KEGG:

id description
K13214 NONO, NRB54; non-POU domain-containing octamer-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021108 True 2099 mRNA 0.59 10 3804211 3809015

Neighbor

gene id symbol gene type direction distance location
AMCG00021101 NA coding upstream 30903 3762081 ~ 3773308 (+)
AMCG00021106 NA coding upstream 43321 3758599 ~ 3760890 (+)
AMCG00021104 NA coding upstream 46519 3757144 ~ 3757692 (+)
AMCG00021103 NA coding upstream 55115 3741481 ~ 3749096 (+)
AMCG00021102 NA coding upstream 72493 3725004 ~ 3731718 (+)
AMCG00021107 NA coding downstream 32585 3841600 ~ 3844289 (+)
AMCG00021112 gpr50,LOC104936099,LOC108436701 coding downstream 97138 3906153 ~ 3915644 (+)
AMCG00021124 NA coding downstream 930126 4739141 ~ 4751627 (+)
AMCG00021123 NA coding downstream 943164 4752179 ~ 4760646 (+)
AMCG00021126 tsc22d3,zgc:64189,LOC107757743,LOC107666597,LOC107561288,LOC107562102 coding downstream 1035736 4844751 ~ 4848172 (+)
G83623 NA non-coding upstream 8600 3795344 ~ 3795611 (+)
G83622 NA non-coding upstream 8969 3794989 ~ 3795242 (+)
G83621 NA non-coding upstream 14965 3789027 ~ 3789246 (+)
G83528 NA non-coding upstream 449925 3353985 ~ 3354286 (+)
G83516 NA non-coding upstream 716302 3087694 ~ 3087909 (+)
G83645 NA non-coding downstream 126681 3935696 ~ 3935955 (+)
G83704 NA non-coding downstream 452986 4262001 ~ 4265982 (+)
G83710 NA non-coding downstream 471093 4280108 ~ 4286600 (+)
G83716 NA non-coding downstream 483111 4292126 ~ 4292364 (+)
G83741 NA non-coding downstream 825721 4634736 ~ 4730944 (+)
G83624 NA other upstream 5428 3797841 ~ 3798783 (+)
AMCG00021076 NA other upstream 1574064 2209482 ~ 2230147 (+)
AMCG00021063 NA other upstream 1884845 1917488 ~ 1919366 (+)
AMCG00021049 NA other upstream 2877736 918006 ~ 926475 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other downstream 318055 4127070 ~ 4129373 (+)
AMCG00021114 NA other downstream 393696 4202711 ~ 4233797 (+)
AMCG00021133 NA other downstream 2735219 6544234 ~ 6546601 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other downstream 3302982 7111997 ~ 7121237 (+)
AMCG00021180 NA other downstream 4231155 8040170 ~ 8043299 (+)

Expression


Co-expression Network