AMCG00021381


Basic Information

Item Value
gene id AMCG00021381
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16110416 ~ 16110859 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021381
ATGAAGCTTTGCAACAGACGCAGGGAGCTCGGCCCCCTCTGTGCTGTGATAGGTCCATGCCTGAGCGCTGGCCCCATTACAGCCAATCGGTGTAGGGCACTCTGCTGTGACGGGGAGGGCGGGGAGACGGTGGCGTTGGTGGTGAGTGGGGGGGTTCACGTTCGTTACGCTCTACGTCAGCGTGGCGTGAATGGAAACCTGTCCAAGATGGCGGCGACCACGGAAAGCAGCAATGCTGGGGCTGGAAGCAAGCGAAAACACTTGGGGATCCCCGAGGCTGTGTTTGTGGTGAGGAGAAAACACCGATCCGTCGTGTCTCGGTTGGGACGGTGCCGGGGCGGAGGGGTTGGCGATCTGTGGGAGCGAGTACGGCGGAGGTATCAGTCCAGTCAGGGAGGAGTGTCCGTTACTACGGCCGGGACTCGCATCCTTAAAAGGCGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021381 True 444 mRNA 0.61 1 16110416 16110859

Neighbor

gene id symbol gene type direction distance location
AMCG00021383 NA coding upstream 2734 16106498 ~ 16107682 (+)
AMCG00021384 NA coding upstream 7207 16102973 ~ 16103209 (+)
AMCG00021375 NA coding upstream 51088 16048516 ~ 16059328 (+)
AMCG00021372 NA coding upstream 72632 16022358 ~ 16037784 (+)
AMCG00021374 snx12,LOC107673821,LOC107733510,LOC107557076 coding upstream 93496 16011194 ~ 16016920 (+)
AMCG00021379 vbp1,LOC107588140,LOC107668907,LOC102781525,LOC107562614 coding downstream 449 16111308 ~ 16113420 (+)
AMCG00021377 rab38c,LOC103035037,LOC108427929,LOC107733499,LOC107673818,LOC108278910,LOC107579578 coding downstream 14662 16125521 ~ 16131258 (+)
AMCG00021378 LOC108434851,LOC107742289 coding downstream 27992 16138851 ~ 16166160 (+)
AMCG00021380 NA coding downstream 65503 16176362 ~ 16181822 (+)
AMCG00021390 siah2l,siah2,LOC102786130,LOC101471392 coding downstream 72964 16183823 ~ 16184805 (+)
G85552 NA non-coding upstream 187695 15920739 ~ 15922721 (+)
G85507 NA non-coding upstream 354984 15753082 ~ 15755432 (+)
G85497 NA non-coding upstream 533898 15575549 ~ 15576518 (+)
G85455 NA non-coding upstream 547499 15561745 ~ 15562917 (+)
G85440 NA non-coding upstream 580744 15487242 ~ 15529672 (+)
G85623 NA non-coding downstream 29664 16140523 ~ 16169886 (+)
G85674 NA non-coding downstream 178890 16289749 ~ 16292193 (+)
G85746 NA non-coding downstream 436798 16547657 ~ 16549345 (+)
G85757 NA non-coding downstream 458588 16569447 ~ 16569650 (+)
G85758 NA non-coding downstream 461334 16572193 ~ 16572868 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 36795 16063499 ~ 16073621 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 678052 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 2037291 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 2076859 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 2673008 13435307 ~ 13437408 (+)
G85764 LOC103366846,LOC106930986 other downstream 479322 16590181 ~ 16592973 (+)
G85787 NA other downstream 545785 16656644 ~ 16714038 (+)
G85869 NA other downstream 887018 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 1359466 17470325 ~ 17473396 (+)
G86121 NA other downstream 2137631 18248490 ~ 18249686 (+)

Expression


Co-expression Network