G86007


Basic Information

Item Value
gene id G86007
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17532619 ~ 17532820 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107347
ttggagatagtcaacatgggtttagacgaggcagatcatgtcttactaatctattagaattttttgaacatgcaactgcagctgtagatcatgtgaaagcatatgatatgatatacttagatttccaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaatgtaag

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107347 True 202 lncRNA 0.37 1 17532619 17532820

Neighbor

gene id symbol gene type direction distance location
AMCG00021440 znf711,LOC107569605,LOC107684921,LOC107746145 coding upstream 25489 17494793 ~ 17507130 (+)
AMCG00021439 NA coding upstream 39960 17483091 ~ 17492659 (+)
AMCG00021442 NA coding upstream 96021 17430466 ~ 17436598 (+)
AMCG00021443 NA coding upstream 104416 17427517 ~ 17428203 (+)
AMCG00021436 NA coding upstream 112797 17404018 ~ 17419822 (+)
AMCG00021451 NA coding downstream 500371 18033191 ~ 18050404 (+)
AMCG00021450 NA coding downstream 528801 18061621 ~ 18067774 (+)
AMCG00021453 NA coding downstream 576258 18109078 ~ 18112221 (+)
AMCG00021454 cetn2,LOC108436166,LOC107710936,LOC107663123 coding downstream 635027 18167847 ~ 18170544 (+)
AMCG00021455 NA coding downstream 644360 18177180 ~ 18188162 (+)
G86006 NA non-coding upstream 5493 17526726 ~ 17527126 (+)
G85999 NA non-coding upstream 18998 17513128 ~ 17513621 (+)
G85993 NA non-coding upstream 23324 17509085 ~ 17509295 (+)
G85992 NA non-coding upstream 23536 17507526 ~ 17509083 (+)
G85976 NA non-coding upstream 72678 17459493 ~ 17459941 (+)
G86018 NA non-coding downstream 48487 17581307 ~ 17585472 (+)
G86020 NA non-coding downstream 81794 17614614 ~ 17616453 (+)
G86034 NA non-coding downstream 115454 17648274 ~ 17648531 (+)
G86117 NA non-coding downstream 690015 18222835 ~ 18226242 (+)
G86118 NA non-coding downstream 696645 18229465 ~ 18229666 (+)
AMCG00021441 NA other upstream 59223 17470325 ~ 17473396 (+)
G85869 NA other upstream 528488 16997877 ~ 17004131 (+)
G85787 NA other upstream 818581 16656644 ~ 16714038 (+)
G85764 LOC103366846,LOC106930986 other upstream 939646 16590181 ~ 16592973 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 1458998 16063499 ~ 16073621 (+)
G86121 NA other downstream 715670 18248490 ~ 18249686 (+)
AMCG00021472 NA other downstream 1514229 19047049 ~ 19055103 (+)
AMCG00021485 NA other downstream 1746945 19279765 ~ 19294779 (+)
G86407 NA other downstream 1966980 19499800 ~ 19501242 (+)
G86601 NA other downstream 2809790 20342610 ~ 20401249 (+)

Expression


Co-expression Network