G440


Basic Information

Item Value
gene id G440
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2372715 ~ 2373156 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU641
GTGTTTCCTAAAGCAGGTCACGATGTCGATCAGTGTTTATAAAGGAACCGTCTTCTAGTGTTCACAGGAGAAACAGTTTCAGAGCGACAACAGTTACAGTGTTTACCAAGCACTGGTGTACAAGAGTTACAAGAGTTACAAGTCTAACTGAGTTTACACAAAtatctgaattttatttttacaaaagtaaCTAGTGTTTACAAAAGTTACACAGCGTCTGAAActattactttaacactatatAGAGTGCAGTATGAccatgtgtgtgtgtgtgtgagtgagtgagagagtgtgtgtg

Function

GO: NA

KEGG:

id description
ko04216 Ferroptosis
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU641 True 298 lncRNA 0.32 2 2372715 2373156

Neighbor

gene id symbol gene type direction distance location
rasa3 rasa3 coding upstream 1580 2334161 ~ 2371135 (+)
LOC122345332 LOC107698899,LOC107751092,LOC107593812,LOC107580773 coding upstream 62327 2301741 ~ 2310388 (+)
mettl21e zgc:92518,LOC107748343,LOC107665805 coding upstream 72311 2297222 ~ 2300404 (+)
ercc5 ercc5,LOC104958986 coding upstream 76014 2286139 ~ 2296701 (+)
trmt10c NA coding upstream 91029 2276446 ~ 2281686 (+)
gas6 gas6,LOC107694478,LOC107573434,LOC107751089 coding downstream 17721 2390877 ~ 2406287 (+)
adprhl1 adprhl1,LOC107694472 coding downstream 96317 2469473 ~ 2481559 (+)
creg1 creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633 coding downstream 188201 2561357 ~ 2564419 (+)
cd247 cd247 coding downstream 191390 2564546 ~ 2573977 (+)
gpa33a NA coding downstream 274271 2647427 ~ 2654848 (+)
G457 NA non-coding upstream 45385 2323285 ~ 2327330 (+)
G439 NA non-coding upstream 96444 2275992 ~ 2276271 (+)
G450 NA non-coding upstream 97374 2275007 ~ 2275341 (+)
G415 NA non-coding upstream 197099 2174322 ~ 2175616 (+)
G408 NA non-coding upstream 253324 2119116 ~ 2119391 (+)
G463 NA non-coding downstream 47320 2420476 ~ 2421647 (+)
G485 NA non-coding downstream 116327 2489483 ~ 2491877 (+)
G504 NA non-coding downstream 166077 2539233 ~ 2540401 (+)
G505 LOC107751062,LOC107570084,LOC107694469,LOC107551096,LOC107747071 non-coding downstream 167331 2540487 ~ 2542309 (+)
G512 NA non-coding downstream 206160 2579316 ~ 2583647 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 180251 2185821 ~ 2192464 (+)
LOC122327253 NA other upstream 931049 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 1251994 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1923075 445940 ~ 449640 (+)
G10 NA other upstream 2194515 177716 ~ 178200 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 110484 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 120416 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 138416 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 151369 2524525 ~ 2527244 (+)
G482 dusp27 other downstream 221775 2594931 ~ 2596302 (+)

Expression


Co-expression Network