G474 (f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060)


Basic Information

Item Value
gene id G474
gene name f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2524525 ~ 2527244 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU696
TTAAGATGTCAAGTGCGTTCAAGTCTCTTTACAATTCTgtataaaactgattttttaaaCATGACAGGAAAAACACGCTTTAAGtgtgttttaggtttttattaaatgcatgtaatttcGAATATTACAATAGTGACATATTTTCTGTCGTAGTTGCACAATACAATGGTATTTTATTCATGTGACGTTAAATGACGAGAGATACAAAATGTTAATCATAGTGCTcgaaatgatatatttttctattacgCCAAGAATCATTAGAATATTGgcgttccatgaagatattcgTACTTTTGACGAATTGTTGATTTTCACATAGTTATATTCTTGATGTACCCAAGAAACCCGACATCAATGGAGACACATTTCATTTGATGCATGAACCTCAATTTAAAAAGCGGCCCCtcgtgactggttttgtggtaacGGTTCcgaaagaaaacacaacaatGTCATTGAGGAGTTATTCATCGGGACGTCAGACTCGGCGCACGGGCGTCTTCCGAAGCAGCTCCCGCTTGGCTTTGGGTTTGATAGATTCCTCCATCTGCGGCATGACTTTGGACATGGCGTTGTGGATCCAGGAGATGTATTTGGAGACCTGCGTGTAGACCCCGTACTTGCCCTTGCGTGCGCAGCCCTCGCCCCAGCTGACCACGCCCGTCACGAACCACGTGTTTCTGTAGCGGGTCACGTGCGGCCCGCCGCTGTCTCCCTGACACGCGTCCCTGTCCCCCCCGGGGTATCCGGCACAGAACATGCGGCTGGAGATCTTGAACTTGCTGGACTCGATGCACTTGCCGCGGTCGATGTACGGCATGGCCAGCTTCTTCAGGACGGTGGTCTGCAGGCCTCCCTCGCGGAGCCGGCCGAAGCCGCTGACCAGACCGTCCGGCTGCCGCATCAAAACGTTCTCGGCGAACTTTTGCTCCGGGAGGCAGGCGGGGATGATGAAGCGGCTGAATCTGATGGGCTTGCTGAGCTTGATGAGGGCGATGTCGTTGTGGTAGGTGTCGGACATGTAGTTCTTGTGGACCAGAATCTCGTCCACGTCGTGTGTGACCTCCTGACCCTCGGTCACCAGCGTGTTGTACTCGCCTGAAAGGAACACACAAACAGGACTGAGATACACAACACCTCAACGATCTCACCTGCTGTCCTCTAGAGGTGAGGAAAACCAGTCAGAGATCTCCGTGTTATTTAACAGTTGTGATTATTAATTACGATCATCGCTTCTTAcactgaatgatgtttataccGTTGCTTGATTTTTACAGACCGtattttaaataagataaaaacaactgaaaaaacatACCACTTTGATCACATTTATCAAGCCTGTGAAATATGCTTCGGAttggttttaaataataaaagtaaaatatacacagtattatAATGCTCTACCAAAAgaactcaaattaaaataatgcagaaacCCTTAAGATAACAAGAAAAGAACGCATCTTAAGCACACAGAATAACAatttatatcaataaaaaattatgaaatatgattattaatgcAGCCCTACTCTGTATGAAGTTTATCATCCAGTGATCTAGCTCTAGACTGTTATGAATTAGTTATGAATAGTCACTTATTTGACTCTTATTAATTTTAGTCTGTttgataaattattcttttagcATTATTGCGcaactattatagtttttgttaatattttaatttgtttgtatatCAGAGTTCCTCTTTTTGGttgtcaattttattttagtctttcgtgtttttttccattttagtttCAACTGACTCCTTTTTGTACAGTGttaaattgaatgaaaatgagaagtgttgccatggcagccagctaatatccacctttttctttaATGCAGAAGTAAGCCTAGACTTCCAGTTCATTAGCCCTTACAGATGAATAACGAGACGAAACAAAGAGCACTGTGTGTTCATCAtcaagataatacattaaaataatataagacACACTAGTTTTCAATaccaagcagcaaaacaaactgtTCTGTACAGCTGGACGTCTATCAGACCGGAAGATAGATACCTAAAATAGAATTTACAAAAGGCCACGCCCATTTTAAGCCAAGAAAAAGTGGgttaactaataataatgagaacACCATAAAATATACTAATGTGAAAGAGCAACATCTCAGCAATAACATgctaaaaacagcttttcttcTGGACCAAAttactgaaaatgttaaataaaggaCGAGGACATGTTTTTGTGATGTTCTTACCTACGACCACGCGGATGGAGAGAGACTGATTCATGCAGTGAGCGGCCGACAGAACGAAGTACTCGTTTAGGATGGTGCCGCCCACGATTCTGGAGTCTGAATTGGAGGACTGGGCCAGAATGATGTCCTCCTTCACCGGATTCACCGGCTCCTGCTCCAGGACACTGTCCGAGTCGTTTCCAGGAGCGCTCGTGACGTCCACGACAGGCTCGGCAGTGCTCTCCTCTTCGTTCTCGGTGTGGTTGACGTGTGTGGGGTTTAACAAGCTTCTGGTCTTCTGAGGATGGACGACCCCGCATTTGAAAGGA

Function

symbol description
f10 Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Acts upstream of or within hemostasis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including epidermis; liver; otic vesicle; pharyngeal arch; and yolk syncytial layer. Human ortholog(s) of this gene implicated in breast cancer and factor X deficiency. Orthologous to human F10 (coagulation factor X).

NR:

description
PREDICTED: coagulation factor X-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU696 True 2561 TUCP 0.23 2 2524525 2527244

Neighbor

gene id symbol gene type direction distance location
adprhl1 adprhl1,LOC107694472 coding upstream 42966 2469473 ~ 2481559 (+)
gas6 gas6,LOC107694478,LOC107573434,LOC107751089 coding upstream 118238 2390877 ~ 2406287 (+)
pros1 pros1 coding upstream 136876 2371927 ~ 2387649 (+)
rasa3 rasa3 coding upstream 153390 2334161 ~ 2371135 (+)
LOC122345332 LOC107698899,LOC107751092,LOC107593812,LOC107580773 coding upstream 214137 2301741 ~ 2310388 (+)
creg1 creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633 coding downstream 34113 2561357 ~ 2564419 (+)
cd247 cd247 coding downstream 37302 2564546 ~ 2573977 (+)
gpa33a NA coding downstream 120183 2647427 ~ 2654848 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding downstream 128889 2656133 ~ 2676029 (+)
ildr1a LOC107751054,LOC107570078 coding downstream 151054 2678298 ~ 2690765 (+)
G485 NA non-coding upstream 32648 2489483 ~ 2491877 (+)
G463 NA non-coding upstream 102878 2420476 ~ 2421647 (+)
G440 NA non-coding upstream 151369 2372715 ~ 2373156 (+)
G457 NA non-coding upstream 197195 2323285 ~ 2327330 (+)
G439 NA non-coding upstream 248254 2275992 ~ 2276271 (+)
G504 NA non-coding downstream 11989 2539233 ~ 2540401 (+)
G505 LOC107751062,LOC107570084,LOC107694469,LOC107551096,LOC107747071 non-coding downstream 13243 2540487 ~ 2542309 (+)
G512 NA non-coding downstream 52072 2579316 ~ 2583647 (+)
G517 NA non-coding downstream 61201 2588445 ~ 2588673 (+)
G518 NA non-coding downstream 61443 2588687 ~ 2589008 (+)
pcid2 pcid2 other upstream 6140 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 35422 2483640 ~ 2489103 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 332061 2185821 ~ 2192464 (+)
LOC122327253 NA other upstream 1082859 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 1403804 1119719 ~ 1120721 (+)
G482 dusp27 other downstream 67687 2594931 ~ 2596302 (+)
G727 NA other downstream 807414 3334658 ~ 3340876 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 1109463 3636707 ~ 3699093 (+)
G824 NA other downstream 1829454 4356698 ~ 4357260 (+)
G826 NA other downstream 1830763 4358007 ~ 4358296 (+)

Expression


Co-expression Network