creg1 (creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633)


Basic Information

Item Value
gene id creg1
gene name creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2561357 ~ 2564419 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242543.1
TGACTATTTGTTATGAAATTCGCTCCTGAATCGATCTTACGAATCATTTCTGTTCACAGTGATCGGTGACTGATCACGTGAATCATTAAAGTTCATATCCTCCCTGTCTCCACTAAATCATTCCTGACGTCACAGAGGTTTTAGGAAGGTTTGGGTCAGCgctgaagatgatgatgatgctgatgaAGAGTCGCTCGCTGCTCGCGGTGTGTGTCGCGCTCGTCGCCGCTGTCGGTGGCTCTCTGTCGGTTCCGCCGCACGAGGAGGTGGCCCGGATGGCCCGGTTCGTGGTCAATAAGTGCGACTGGGCTTCGATGGCCACGATCTCCACTCACGACCCGGTCCTAGGACAGCCCTTCTCCAACGCCTTCTCCATCAGCGACGGGCCCGCCGGCAACGGAACCGGAACCCCGTACCTGTATCTGACTCACCTGGAGATCTCGGTGCAGGACCTGCAGgtgAATCCCCAGgcgtctctctctgtgtctttggCTCAGACCAGCTACTGTAAGAATCATGGGTTCGATCCTCAGAGTCCGCTGTGTGCCCACATCATCCTGTCAGGCTCCGTGGTGGAGGTGAACGGCAGCGAGGCCTCGGTGGCTAAAGCCGCTCTGTTCAGTAGACACCCAGAGATGATCGACTGGCCCACAGACCACAGCTGGTTCTTCGCTAAGATGAACATCACACAGGTCTGGGTCCTCGATTACTTCGGTGGAGTGAAAACCGTCACGCCGGAGGAGTATTACCAAGCGACTCCTTACCGGAAACACCGCGGAAGTGACACGCTGTAATCCTGGTGAACCGGATCAGAATCACTGATGAAGAGTTTCAGAAGAGACCAGAGTGATGAATGTTTCTCAGggtgttactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagatgcatTAAGCCCATGTTGTTAATTTCTCCAGAACATTAATGCAGCATGATGTTAATCTAGTTGCCACATTTTTTGtaagcattttttgtaaaatgcttcCGAATGATTTTTTGCAGTTTGCACAAGCGCTTTCCTTCGACTGAttcacagcaaacacacacagactgaaatCTGAAGTGAGATTCTGGGTCAGTCTTAGACGTCACCCCTAAAcgttgacctctgaccccgtaGCAGGAAGTGTGAGTCTCACCAGAAGTGTTTTGTAGTCGTAGTCGTGTGTTTTTACGCACCGCTCCAGACGAATCATTTATTCAGAGTGATTATTTTTCTAAAGctgatgtgtatttttaatcatttttgacGTGATGCAGTGAAATAAAGAGCAGATTTTTGATTGAA

Function

symbol description
creg1 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blood. Orthologous to human CREG1 (cellular repressor of E1A stimulated genes 1).

NR:

description
PREDICTED: protein CREG1-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0010181 FMN binding molecular_function

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242543.1 True 1309 mRNA 0.50 5 2561357 2564419

Neighbor

gene id symbol gene type direction distance location
adprhl1 adprhl1,LOC107694472 coding upstream 79798 2469473 ~ 2481559 (+)
gas6 gas6,LOC107694478,LOC107573434,LOC107751089 coding upstream 155070 2390877 ~ 2406287 (+)
pros1 pros1 coding upstream 173708 2371927 ~ 2387649 (+)
rasa3 rasa3 coding upstream 190222 2334161 ~ 2371135 (+)
LOC122345332 LOC107698899,LOC107751092,LOC107593812,LOC107580773 coding upstream 250969 2301741 ~ 2310388 (+)
cd247 cd247 coding downstream 127 2564546 ~ 2573977 (+)
gpa33a NA coding downstream 83008 2647427 ~ 2654848 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding downstream 91714 2656133 ~ 2676029 (+)
ildr1a LOC107751054,LOC107570078 coding downstream 113879 2678298 ~ 2690765 (+)
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding downstream 127323 2691742 ~ 2700224 (+)
G505 LOC107751062,LOC107570084,LOC107694469,LOC107551096,LOC107747071 non-coding upstream 19048 2540487 ~ 2542309 (+)
G504 NA non-coding upstream 20956 2539233 ~ 2540401 (+)
G485 NA non-coding upstream 69480 2489483 ~ 2491877 (+)
G463 NA non-coding upstream 139710 2420476 ~ 2421647 (+)
G440 NA non-coding upstream 188201 2372715 ~ 2373156 (+)
G512 NA non-coding downstream 14897 2579316 ~ 2583647 (+)
G517 NA non-coding downstream 24026 2588445 ~ 2588673 (+)
G518 NA non-coding downstream 24268 2588687 ~ 2589008 (+)
G486 NA non-coding downstream 38772 2603191 ~ 2606077 (+)
G527 NA non-coding downstream 61626 2626045 ~ 2627404 (+)
setdb2 LOC107570068 other upstream 2830 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 34113 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 42972 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 72254 2483640 ~ 2489103 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 368893 2185821 ~ 2192464 (+)
G482 dusp27 other downstream 30512 2594931 ~ 2596302 (+)
G727 NA other downstream 770239 3334658 ~ 3340876 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 1072288 3636707 ~ 3699093 (+)
G824 NA other downstream 1792279 4356698 ~ 4357260 (+)
G826 NA other downstream 1793588 4358007 ~ 4358296 (+)

Expression


Co-expression Network