LOC122346006 (cpo,LOC107556274,LOC108440461)


Basic Information

Item Value
gene id LOC122346006
gene name cpo,LOC107556274,LOC108440461
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 4659870 ~ 4664510 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240631.1
AGTCACTGTCAGGCTGTACTAGGTTTATACCGTCAGGATTCAACAAGCCTGGATAACATGAGGGGCTTAGTAATATCTGTTCTGGTGGTCTTGGCTTTGGTGGCTCAGGACAGCTCTGCTGGTGGACTGGAACACAGCTCATATGACTACACGAAGTATCACACCATGGATGAGATCTCAGCCTGGATGAATCAGATGGAAAGGGAAAACCCAGACGTTGTGTCCAGCATGATCTATGGACAAACTTATGAGAACAGGAACATTACATTACTAAAGATCGGCCTCAACAGCAGCACACCCAAGAAAGCTGTTTGGATGGACTGCGGGATTCATGCCAGAGAATGGATTACTCCAGCTTTCTGCCAGCATTTTGTTAAAGAGATTCTGGGCTCCTACAAAACAGACTCGAAAGTGAACATGTTGCTTAAAAACCTGGACTTCTACATCACCCCAGTGCTGAACATGGACGGATATATTTACTCCTGGAGGGATAACACAacTCGACTATGGAGAAAGTCCAGATCACCAGGGCCTGGAAACTGCACATGTTATGGCACTGATCTTAACCGCAACTTTTATGCTAACTGGGGGATGGTGGGGGTCGCCAGGAACTGCTGTTCAGTCATCTACAACGGACCGACTGTTCTTTCTGAACCAGAGGCCAAAGCCGTCACTGACTTTTTGGGAGCACATCAAAACCAACTGCTCTGTTTCCTCACCATACACTCGTTTGGTCAACTTATCCTCGTCCCGTACGGACACCCCAACATCTCAGCACCCAATTATGATGAACTGATGGAAGTAGGTCTCGCTGCAGCTAAAGCCATCAAAGAAGTGCATGGGAAGAGCTACAAAGTGGGAACTCCACCTGATATACTGTATGAATTTTCTGGCTCTTCATATGATTTTGCGAGGCTCATAGGGATCCCATACTCCTTCACAATTGAGTTACGAGATGAAGGACACTACAGCTTCCTTCTACCTGAGGATCAAATCCAGCCCACATGTGAAGAAGCGTACCAGGGTGCAATGTCCATCATAAACTATGTCCATGATAAGAATTTCAAAAGTGCAGCGATTACAGTCACAACCACACTGTGGACAACACTGACCGCCTTATGGATCTCAAGTGCTAATGGGTTTTAGACCACTTTATCAAAATAGgatcatgtgatttttttaaaaaaacttgtttCATTTAATGCTCAAACAAGAACTgtgtaacaatatatatatatcactgtctaatgtaataaaattcagATGTATGTTAGTGTGAA

Function

symbol description
cpo Enables metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Is anchored component of plasma membrane. Is expressed in intestinal epithelium. Orthologous to human CPO (carboxypeptidase O).

NR:

description
PREDICTED: carboxypeptidase O

GO: NA

KEGG:

id description
K23009 CPO; carboxypeptidase O

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240631.1 True 1280 mRNA 0.44 9 4659870 4664510

Neighbor

gene id symbol gene type direction distance location
LOC122346016 cpo,LOC107556274,LOC108440461 coding upstream 1978 4652632 ~ 4657892 (+)
LOC122346000 cpo,LOC107556274,LOC108440461,LOC108258336 coding upstream 10503 4644934 ~ 4649367 (+)
atic atic,LOC107556291,LOC107750210,LOC107674004,LOC107549437,LOC107750055,LOC107676052 coding upstream 62793 4590031 ~ 4597077 (+)
stk16 stk16,LOC107674016,LOC107750290,LOC107676064 coding upstream 98160 4555505 ~ 4561710 (+)
tuba8l2 tuba8l2,LOC107750365,LOC107556293,LOC103042625,LOC108411703,LOC107549435 coding upstream 105184 4548452 ~ 4554686 (+)
abcb6a abcb6,abcb6a,LOC107676041,LOC106574324 coding downstream 258017 4922527 ~ 4931978 (+)
cnppd1 cnppd1,LOC107706838,LOC107676054,LOC107750058,LOC107549439,LOC107556284 coding downstream 267945 4932455 ~ 4937679 (+)
retreg2 fam134a,LOC107706836,LOC107676053,LOC107556270,LOC107750069,LOC107673992 coding downstream 281329 4945839 ~ 4955043 (+)
fastkd2 LOC107673994 coding downstream 295814 4960324 ~ 4966920 (+)
si:ch211-93g23.2 si:ch211-93g23.2,LOC107725372,LOC107674017,LOC107556277 coding downstream 481398 5145908 ~ 5148890 (+)
LOC122346166 NA non-coding upstream 31952 4624047 ~ 4627918 (+)
G853 NA non-coding upstream 40141 4619243 ~ 4619729 (+)
G872 NA non-coding upstream 42931 4616118 ~ 4616939 (+)
G870 NA non-coding upstream 44468 4614818 ~ 4615402 (+)
G869 NA non-coding upstream 45740 4613572 ~ 4614130 (+)
LOC122346140 NA non-coding downstream 231994 4896504 ~ 4918795 (+)
G948 NA non-coding downstream 312912 4977422 ~ 4977914 (+)
G1016 NA non-coding downstream 374210 5038720 ~ 5101322 (+)
LOC122346173 NA non-coding downstream 462980 5127490 ~ 5138854 (+)
G1036 NA non-coding downstream 492212 5156722 ~ 5156981 (+)
G826 NA other upstream 301574 4358007 ~ 4358296 (+)
G824 NA other upstream 302610 4356698 ~ 4357260 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other upstream 960777 3636707 ~ 3699093 (+)
G727 NA other upstream 1318994 3334658 ~ 3340876 (+)
G482 dusp27 other upstream 2063568 2594931 ~ 2596302 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 273671 4938181 ~ 4944841 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other downstream 302676 4967186 ~ 4977263 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other downstream 314615 4979125 ~ 5025914 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other downstream 1214950 5879460 ~ 5881134 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other downstream 1392894 6057404 ~ 6087655 (+)

Expression


Co-expression Network