LOC122346016 (cpo,LOC107556274,LOC108440461)


Basic Information

Item Value
gene id LOC122346016
gene name cpo,LOC107556274,LOC108440461
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 4652632 ~ 4657892 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240644.1
CTGTACTAGGTTCATACCGTCAGGATTCAACAAGCCTGGATAACATGAGGGGCTTAGTAATATCTGTCCTGGTGGTCTTGGCTCTAATGGCTCAGGACAGCTCTGCTGGTGGACTGGAACACAGATCATATGACTACACGAAGTATCACACCATGGATGAGATCTCAGCCTGGATGAATCAGATGGAAAGGGAAAACCCAGACGTTGTATCCAGCATGATCTATGGACAAACTTATGAGAACAGGAACATTACATTACTAAAGATCGGCCTCAACAGCAGCACACCCAAGAAAGCGGTTTGGATGGACTGCGGGATTCATGCCAGAGAATGGATTACTCCAGCTTTCTGCCAGCATTTTGTTAAAGAGATCCTGGGCTCCTTCAAAACAGACTCGAAAGTGAACATGTTGCTTAAAAACCTGGACTTCTACATCACCCCAGTGCTGAACATGGACGGATATATTTACTCCTGGAGGGATAACACAACTCGACTATGGAGGAAGTCCAGATCACCAGGGACTGGAAACTGCACATGTTATGGCACTGATATTAACAGCAACTTTTACGCTAACTGGGGGATGGTGGGAAACTCCAGGAACTGCTGTTCAGTCCTCTATAACGGACCGACTGTTCTTTCTGAGCCAGAGACCAAAGCCGTCACTGACTTTTTGGGAGCACATCAAAACCAACTGCTCTGTTACCTCACCATACACTCGTTTGGTCAACTTATCCTCGTCCCGTATGGACACCCCAACATCTCAGCACCCAATTATGATGAACTGATGGAAGTAGGTCTCGCTGCAGCTAAAGCCATCAAAGCAGTGCATGGGAAGAGCTACAAAGTGGGAACTCCACCTGATATTATGTATGCAAACTCTGGCACTTCGCGTGATTTTGCGAGGCTCATAGGGATCCCATACTCCTTTACGTTTGAGTTACGAGATGAAGGACACTACGGCTTCCTTCTACCTGAGGATCAAATCCAGCCCACATGTGAAGAAGCGTACCAGGGTGCAATGTCCATCATAAACTATGTCCATGATAAGAATTTCAAAAGTGCAGCGATTACAGTCACAGCCACACTGTGGACAACACTGACCGCCTTATGGATCTCAAGTGCTAATGTGTTTTAGACCACTTTTCATAAAAAAGGgtcatgtgattttatttttcaaaaatgcttgttgttttatttaatgctcaGAACTGTGTAACAAAAGCCACCTggttatatattttactgtctaatgtaataaaatttgtgtgaattatg

Function

symbol description
cpo Enables metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Is anchored component of plasma membrane. Is expressed in intestinal epithelium. Orthologous to human CPO (carboxypeptidase O).

NR:

description
PREDICTED: carboxypeptidase O

GO: NA

KEGG:

id description
K23009 CPO; carboxypeptidase O

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240644.1 True 1273 mRNA 0.44 9 4652632 4657892

Neighbor

gene id symbol gene type direction distance location
LOC122346000 cpo,LOC107556274,LOC108440461,LOC108258336 coding upstream 3265 4644934 ~ 4649367 (+)
atic atic,LOC107556291,LOC107750210,LOC107674004,LOC107549437,LOC107750055,LOC107676052 coding upstream 55555 4590031 ~ 4597077 (+)
stk16 stk16,LOC107674016,LOC107750290,LOC107676064 coding upstream 90922 4555505 ~ 4561710 (+)
tuba8l2 tuba8l2,LOC107750365,LOC107556293,LOC103042625,LOC108411703,LOC107549435 coding upstream 97946 4548452 ~ 4554686 (+)
spry2 spry2,LOC107549433,LOC107750630,LOC107674014,LOC107676062,LOC107750049,LOC107556294 coding upstream 153393 4495194 ~ 4499239 (+)
LOC122346006 cpo,LOC107556274,LOC108440461 coding downstream 1978 4659870 ~ 4664510 (+)
abcb6a abcb6,abcb6a,LOC107676041,LOC106574324 coding downstream 264635 4922527 ~ 4931978 (+)
cnppd1 cnppd1,LOC107706838,LOC107676054,LOC107750058,LOC107549439,LOC107556284 coding downstream 274563 4932455 ~ 4937679 (+)
retreg2 fam134a,LOC107706836,LOC107676053,LOC107556270,LOC107750069,LOC107673992 coding downstream 287947 4945839 ~ 4955043 (+)
fastkd2 LOC107673994 coding downstream 302432 4960324 ~ 4966920 (+)
LOC122346166 NA non-coding upstream 24714 4624047 ~ 4627918 (+)
G853 NA non-coding upstream 32903 4619243 ~ 4619729 (+)
G872 NA non-coding upstream 35693 4616118 ~ 4616939 (+)
G870 NA non-coding upstream 37230 4614818 ~ 4615402 (+)
G869 NA non-coding upstream 38502 4613572 ~ 4614130 (+)
LOC122346140 NA non-coding downstream 238612 4896504 ~ 4918795 (+)
G948 NA non-coding downstream 319530 4977422 ~ 4977914 (+)
G1016 NA non-coding downstream 380828 5038720 ~ 5101322 (+)
LOC122346173 NA non-coding downstream 469598 5127490 ~ 5138854 (+)
G1036 NA non-coding downstream 498830 5156722 ~ 5156981 (+)
G826 NA other upstream 294336 4358007 ~ 4358296 (+)
G824 NA other upstream 295372 4356698 ~ 4357260 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other upstream 953539 3636707 ~ 3699093 (+)
G727 NA other upstream 1311756 3334658 ~ 3340876 (+)
G482 dusp27 other upstream 2056330 2594931 ~ 2596302 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 280289 4938181 ~ 4944841 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other downstream 309294 4967186 ~ 4977263 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other downstream 321233 4979125 ~ 5025914 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other downstream 1221568 5879460 ~ 5881134 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other downstream 1399512 6057404 ~ 6087655 (+)

Expression


Co-expression Network