LOC122351641


Basic Information

Item Value
gene id LOC122351641
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1328385 ~ 1331549 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248864.1
TTCATTACACGGAAATGGACTTTTGTATAACAGAAATGTCTCTACAACGCTTGATGTTGGTCGCCATCTGCATTGTGTTCAAAGCCTCAGAAGCTGTTTTAGgtGAAGAGGTGAAGAAAGCTGTGGGCGAAACGGTTTCTTTTCGTCCAGAAAATGTAAAGCCTCCTGTAACTATTACATGGAAACAGATAAGTGATTCTGGTACTGTTAAGGCGATTGAATGGGATAATGATGATCAGAGATATTATAAACCTCATCCGAGATTCAGTGACTCCACATCTCTCAATAAGGAAACGGGAGAAATcactataaataatttaaaactcgAGCATAGTGGAACGTACATCATTGACATCAACATTAAAGAGCAGAAGCAAAGATTCACCTTGAAAGTTATGGaGCGGGTTCCCAGACCTGAGATAACTAAAGAGGACAGCAGTAATCCTGATGTGGTGTATTTAAGATGTGAATACAATGAAATGATCGTCTGGAGGAATTCTGCTGGAGTACTGGAGGATCAGAACAACAAGAAAGAAATCTCAGttaaaaaaacaggaaatgctGAAAACGTCTACACCTGCACACTCAAGAACGATGTGAGCGAAGAGACCAGTGATCCGGTCTACGAGAGAGATCTGTTTAAAGACACACAGGGATCTGTCATTTGGATTGCCATTATTTCAAGCAGCACAGTATTTATCCTCCTTTTTCTGTTTATACCACCTTTTTACGGTAAGACTACTGTTGTGCtttatcttttaaaacatttaaaatttcttatgttttttttccatttggtttaaactcaaaacaaacattttttaaaaatgcaacatatttTCGAATGAAACATTTGATTGGattgttaaacaaaaaataactcaAAGCATCCAGACCTAAAGGTTCTGATtccaaaatcatttaaatgatgcAGTTTGTGAACATTTGCATTGAGCAATTTTTTATGAAGGTATTTTTGAATGACGCACGTTCGTGAAATGTTTGAATGTGTATTAATAAAGTAAGCAGTCAGTTATGATTTTCACTGTTGGTGTCACAGATTATTGTGCTGCTCGCTCTGGGAGACACAGGACTTCCAGAGTAAGTTTATGTCTGATTTGTTTGTGAAAAGTATTATGTGCAATATCAAAGACAAACTGAACAGTTTTTAGTCTAACAGATAAACTACAgctatgctttaaaatgttaatcattagcatttttcctgtttttttcctccttcagAAATGAGAGCCGACTCTTTTATTTTGTCCTGATGAAACATTCAGCTTAATCCCGTTCTAAGACTTCTAacagtttagattttttaaatcagtttttaatattatccaTGGTGCTGTGTATATCTGAACAAGACgtccaggacctccagcagaaaatattaaagataCTAGCAGTATATTTGATCGTGTAcgtgctttttattttcttggatgctttttcagGAAGTACGCGCGGGCTTGAATAAATGCACTTTGTTGCACAAACACGGTTTacggtatttttttatttgcaaattcTGTTAAATCTTGTCTGTCCTCATAAACACACATCCTGTTAGGAGCTATAAGCGGCATAAAACGGTTATTCTGCGCGCTTGTGATCTTACAGGAGCCCCGAAGCTAACGTTAGTTCTTTGTTTTGcgtttcataaaaaataataaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248864.1 True 1687 mRNA 0.36 4 1328385 1331549

Neighbor

gene id symbol gene type direction distance location
LOC122347468 LOC107653668,LOC107730391,LOC107746981,LOC107559791,LOC107677846,LOC107555244,LOC107730385 coding upstream 66417 1246693 ~ 1261968 (+)
LOC122347479 LOC107730391,LOC107653668,LOC107677846,LOC107555244,LOC107746981,LOC107559791 coding upstream 78051 1245163 ~ 1250334 (+)
LOC122341978 NA coding upstream 280574 1043183 ~ 1047811 (+)
ggact.3 NA coding upstream 282596 1043185 ~ 1045789 (+)
LOC122342042 LOC107746594,LOC107582328,LOC107686751 coding upstream 589463 729071 ~ 738922 (+)
LOC122350806 NA coding downstream 3375 1334924 ~ 1346793 (+)
LOC122348945 LOC107718016,LOC107555266,LOC107568777,LOC107709315,LOC106575573,LOC108429863,LOC105889574 coding downstream 124537 1456086 ~ 1465285 (+)
runx1 runx1,LOC107555250,LOC107698911,LOC108429862,LOC107653683,LOC107571884 coding downstream 193558 1525107 ~ 1570888 (+)
LOC122347221 LOC107751081,LOC107698893,LOC107555241 coding downstream 243069 1574618 ~ 1583412 (+)
LOC122343461 NA coding downstream 253063 1584612 ~ 1591930 (+)
G175 NA non-coding upstream 109651 1218065 ~ 1218734 (+)
G138 NA non-coding upstream 116242 1126766 ~ 1212143 (+)
G139 rap2ab,rap2a,LOC105911819,LOC106512668,LOC106582448,LOC105933629,LOC101166017,LOC103391592 non-coding upstream 177216 1148386 ~ 1151169 (+)
G162 kpnb3,ipo5,LOC107677849,LOC107653674,LOC107555240 non-coding upstream 200295 1126466 ~ 1128090 (+)
G141 NA non-coding upstream 245006 1050762 ~ 1083379 (+)
LOC122350990 NA non-coding downstream 26285 1357834 ~ 1402615 (+)
G217 NA non-coding downstream 52204 1383753 ~ 1384030 (+)
G203 atp1a1a.1,LOC107718011,LOC107698904,LOC107555257,LOC107653678,LOC107717912,LOC105923069 non-coding downstream 65350 1396899 ~ 1398974 (+)
G227 NA non-coding downstream 135936 1467485 ~ 1468131 (+)
G270 NA non-coding downstream 153597 1485146 ~ 1485643 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 207664 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 878745 445940 ~ 449640 (+)
G10 NA other upstream 1150185 177716 ~ 178200 (+)
LOC122327253 NA other downstream 107491 1439040 ~ 1441666 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 854272 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 1152091 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 1162023 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 1180023 2511572 ~ 2518385 (+)

Expression


Co-expression Network