LOC122343461


Basic Information

Item Value
gene id LOC122343461
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1584612 ~ 1591930 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237937.1
TGTTCCTCGGGCCTCGAGCGCTCCCGGCTTCACTGTGAACTCAAGACGGGACCAGAGCGGCTCGGAAAACACCAGAAGGAATCTAGAAGACTGAGGACTCGgtTTTCTGAGAGGAAATGCATATTCTTGGGactactttcttttttattacactCCTGAAAGCCTGTCTAGGCGTCTACCTCCAGTGGCCGGAGGCCGAGGTGTACATCGGAGAGAGCGTGATCTTGTCCTGCAACGGTTCGGGGTTCTCTGGGGGAGAGCTGTATGTTCGCTGGGAGGCGACGGGCAAAGACGTGATCACCCTGCGAGGGGACGCCGTCTCGGTCGGGAGAGGCTTCGAAGGTCGCGTGAACTTCCTCAGAGATCCGGCGGAGTCGGGGGACTTTTCCCTCGTTCTGTCAGACGTGATGCTCAACGATGGAGAAGTATACGAATGTCTCTGGGAGGGAATAAAACCCATTTGCTTCGTGGAACTATACGTGTTGACACCAGCGTTTTTTAACCACAACGTTGCCGTCTTCGAGGGCGACACCATCACTTTGGACTGCTTCGGAAACATCCCTAAAAACAAACCCTGGGAAGACATTTATGTGCAGTGGCTGAAGGACGGCAGAGAGATCCTGCGCTTCGGTTCGGGGGAGACGAGCGCCGCGGAGCACAGAGTCCTGAGGTTACCGGACAAACACGAGCTCGGCCGCGGCGTCTTCTCTCTGAGCGTCCCTTCGGTCCGTGCTTCAGACTCCGGCGTCTATGAGTGCCGCTACAAGAGAACCCACTATGAAGAGCTGCAGAACGGGTTCCCAGAGAAACTCACGCTCATGGTTTGGGctgtatcTTCTGtctcagtgtctctctctcagtctcaggAGAGTAGTAGTGTACTGGTTTGGACTCAGACTGAAAGCAGCGGGTCTCTGCCAACACTGACATACACTGAGAGAGACGGAGCGACGACAGAGACCTCAGTAACTAAGACAGCCACTCACTCTGtGACGACAGACCCGTCAGTCACAGACACAGAGTTTTCTCTTCTAGTGAAAGATACTGATTCTGTGACCACAGATATATCCGTTCCAGCAGACACTGCTTCAGTGATGACCGACCCGTCAGTCCCAGACACAGGCACCGGTTCTGGTCAGCGGGATCCTCTGGAGCTCCGGTCGGACGAGGTTCCCTGGATCCGCGTCGCTCTCATCAGCGGCGTGCTGCTCGTCACGGCCGTCGTTCTGGCTTTATTACTGGTGTTTGAAAGAATCTGAGTCGATGGGAGAGAGTACACTACTGAAAGGATGCAAGTTCCACACATTTCCAGGCAAACGGCTCGTTTTGTTCCTGAAACAGACCGAAATGGGGACGGTTTGTAATGCGCTTTATATCAACCTCCTGAACATGGTGCTATCTATAGCCGTAAACGGTGCGTTTGTGCATTTATGTTCTTTAAGATGCATGAGACGACTTAATGTTATGTGACATTATGATTAGAAGAACAAATGTGACAATGGACTCAAAAATGGTTTCCGTTCTCCATTGACGTATTTGCTTCAAGCGTAAACCcaatttaatgtcattttacatCTCAAGTAAAATTTAAGAACGATTAgatgtttataaatgttaaaacaaaataccaattttttttttttgcaccacaTGCAACATTAATGCCACTGCTTCTCAAATTTAAAGCTTTAAGGATGAATTAATAACCCTGattataaactacatttttactaaacttggctaaaatagaaaattaggaacatgctttttttgcagtttat

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237937.1 True 1781 mRNA 0.49 11 1584612 1591930

Neighbor

gene id symbol gene type direction distance location
LOC122347221 LOC107751081,LOC107698893,LOC107555241 coding upstream 1200 1574618 ~ 1583412 (+)
runx1 runx1,LOC107555250,LOC107698911,LOC108429862,LOC107653683,LOC107571884 coding upstream 13724 1525107 ~ 1570888 (+)
LOC122348945 LOC107718016,LOC107555266,LOC107568777,LOC107709315,LOC106575573,LOC108429863,LOC105889574 coding upstream 119327 1456086 ~ 1465285 (+)
LOC122350806 NA coding upstream 237819 1334924 ~ 1346793 (+)
LOC122351641 NA coding upstream 253063 1328385 ~ 1331549 (+)
zgc:152904 zgc:152904,ncam2,LOC107698913,LOC107751079,LOC107721821 coding downstream 120112 1712042 ~ 1893196 (+)
LOC122345473 LOC107751076,LOC107593744,LOC107698914,LOC100332351 coding downstream 345520 1937450 ~ 1941621 (+)
gart gart coding downstream 350131 1942061 ~ 1961643 (+)
LOC122350785 adamts5,LOC107751075,LOC107593743 coding downstream 561306 2153236 ~ 2171533 (+)
adamts1 adamts1,LOC107698918,LOC107751074,LOC107593742 coding downstream 586281 2178211 ~ 2184501 (+)
G270 NA non-coding upstream 98969 1485146 ~ 1485643 (+)
G227 NA non-coding upstream 116481 1467485 ~ 1468131 (+)
LOC122350990 NA non-coding upstream 181997 1357834 ~ 1402615 (+)
G312 NA non-coding downstream 313722 1905652 ~ 1905963 (+)
G318 NA non-coding downstream 338727 1930657 ~ 1991767 (+)
G319 NA non-coding downstream 339886 1931816 ~ 1933144 (+)
G320 NA non-coding downstream 344243 1936173 ~ 1951320 (+)
G404 NA non-coding downstream 489542 2081472 ~ 2081820 (+)
LOC122327253 NA other upstream 142946 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 463891 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1134972 445940 ~ 449640 (+)
G10 NA other upstream 1406412 177716 ~ 178200 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 593891 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 891710 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 901642 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 919642 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 932595 2524525 ~ 2527244 (+)

Expression


Co-expression Network