LOC122350785 (adamts5,LOC107751075,LOC107593743)


Basic Information

Item Value
gene id LOC122350785
gene name adamts5,LOC107751075,LOC107593743
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2153236 ~ 2171533 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247501.1
tgtgttttgttctccAAGTTCACTTTAGTTCTCGTCCCTCTCTCATCCTGCTTCCACGCGTTTGTTTCCGTGACGCGCGCGTGATGCGCACCGGGACTCGTGGATCAGACCGGCTCCGTGATTCAAAACCGCGCTTCGGATCGTAATGCTTCCAAAAGTTTTCCGCACCGGATTGAACTGCATGGAATAATGTGGCGAATCGTGCTGCTGTGCTGCGCTCTGGAGGCTTCCGTCGCGTCCCGTCCACCTGCGAACGCGTCTCTCCTCGCACCTGTCCGCGGCGTCGTGCGCACCGTGGACCGGATCTACCACGGAGGAGGGAAAGCCGGTTATCTTCTGTACATGGACGAGCGGCGCTTTCAGCTGGATATGGAGCGGGATGAGTCTCTACCGCCTCGTCGCTTCGGTTTGAACGCGGACGCGCCGTCGCGTCGGGAGTGCGTTTACCGCGGCACCGTCAACTCGAACGCGGAGTCGCTCGCGCTTTTCAATCTGTGCGGCGGCGGACTCGACGGCTTTTTTGCGGTGGATGACGCGCGGTACACCGTCACGCCGCTCATCCGAGCGAAGGGCCACGAGAACGACGCGTGCGTCGTCGAGGACGCAGACGCGACGCGCGCTCTCCACTACTACACGCGCGAGAGCTTCGGTTTCGAGGCGATGCCCGCGCGGCACAGCTGCGGCACGCGCGACCGCAGAGCGCGCAAGGCGCGGAAGACGCGACGCAAGCGCTCCGTGTCCCGCGCGCGGCACGTGGAGCTGCTGCTGGTCGCGGACGCGTCCATGACGAAGAAGTACGGCAAGGACCTGCAGCATTACCTGTTGACGCTCGCGTCCATCGCGTCCAAGCTCTACGGCCACGCCAGCATCGAGAACCCCATCCGCCTGTCGGTGGTCAAAGTCGCGGTCCTGTCCGAGAACGAGAAGGGCATCGAGGTGTCCAAGAACGCCGCCGCGACGCTCAAGAGCTTCTGCAAGTGGCAGAATCAGCAGAACCCCCTGGATGACGACCATCAGCATCACCACGACGCGGCGATCCTCTTCACCAGGCAGGATCTGTGCGGTCATCACTCGTGTGATACTCTCGGTATGGCTGATGTAGGAACTGTGTGTTCTCCGGAGCGGAGCTGCGCAATCATCGAAGACGACGGGCTTCATGCCGCCTTCACCGTGGCACACGAGATCGGGCACCTGCTGGGTCTGTCTCACGATGACTCTAAGTTCTGTGAGGAGCGTTTCGGTTCGACTGAAGACAAGCGGCTGATGTCTTCGATCCTGACCTCCATCGACGCGTCCAAGCCCTGGAGCCGCTGCACCTCCGCCACCATCACAGACTTCTTCGACGACGGAAATGCCGAGTGTCTGCTGGACGCTCCTCGAATGCCTCTCCTGGGTCCGGAGGAGCTTCCGGGTCAGAGCTATGATGCGGTGCAGCAGTGCCGGCTGGCCTTCGGCCCGGAGTACACTGTGTGTCCCGGGATGGACGTGTGTGCCCGTCTCTGGTGTGCCGTCATCAGGAAGGGTCAGATGGTGTGTCTGACCAAGAAGCTCCCGGCCGTGGAGGGAACGCCGTGTGGGAAGGGCCGGATCTGCCTGCAGGGGAAGTGCGTGGACAAAACCCGAAAGAGACACTACTCGACGTCCAATCACGGCAGCTGGAGCTCCTGGGGTCCGTGGGGCTCGTGTTCTCGCTCGTGTGGCGGCGGGGTCCAGTTCGCTCATCGTCTGTGTAATAACCCTCCTCCACGAAACAACGGCCGCTACTGCACCGGGAAGAGAGCCGTGTACCGCTCCTGCAGCGTCACGCCGTGTCCGTCAGCCGATCTGTCTGCGTCAGGTAAGAGCTTCCGTCAGGAGCAGTGCGAGCTACGAAACGGCCCTCAGACGGACCCTAAAGGGGTGAAGACCTTCGTGGAATGGGTGCCCAAGTTTGCCGGCGTGCTTCCCAAAGACATGTGCAAACTCACCTGCAGAGCCAAGGGCACGGGATACTACGTGGTGTTCTCCCAGCGGGTGGCTGATGGGACGGAGTGCCGGCCGTACAGCAGCTCAGTGTGTGTGAAGGGAAAGTGTGTTCGCACCGGCTGTGACGGGATCATCGGCTCTAAACTCCAGTATGATAAGTGCGGCGTCTGCGGCGGAGAAGGAAACAGCTGTATCAGAGTGGCTGGAAACTTCACCAAGAAGAGTAAGGGCTACACGGATGTGGTGAAGGTCCCCGAGGGCTCGACGCACCTGAAGGTCCGACAGTACAAGGCTAAAGGTCAGTCGCGCTACACGGCGTACCTAGCGCTTCGGCGGCCCGGAGGAGAATACCTGCTCAACGGGAAGTTCATGATCTCCACGTCCGAGACCATCATCCCTCTCAACGGCTCCGTTCTCAACTACACCGGCTGGAGCCAGCGGGACGAGGCCCTTCACAGCATGGGCCCCGGGGCCCTTCGGGAGAGCCTGGTGGTGCAGATTCTAGCCACGGACGCTAAGAAACCACTAGACATCCGCTACAGCTTCTTCATGCCACGCAAAATGCCGCTTCCACCACGAACGGTCGCCGCGGTTTCCGGAACCGCCGCGGCGCTGTCCTCGGCGGAGATCGTGACGTTTACGACGGACGTTCCCGTGACGACGGAGCCTCCGACGACAACGGCGCTCGCGGGGCCACGCTGGGTGACGGGGTCGTGGATGACCTGCTCCAGAACTTGCGATACGGGTTGGCAGAGTCGCACGGTGCAATGCAAGGACCCTCAGGGGAAGCTGTCCAAGAGCTGCCCGCTCAGCGCCCGGCCGTCAGCCTTCAAACACTGCCTGATCAAAAAGTGTTGAGGACCCCTCAATGTAGACGAACTTCCTGACTGAGCTTCGTGGAGCACGTAGACTGAAGCGCTGCAGTTGCGTTCCGATCACTGTGGGATTCTGCTAGCATTCGCAATAGTGTTGCGTTGTGACTCGGAACAAAGAGCTTTGCTTCGAGCCTTGAATGTGGTGATGGTTAGCCACGCCCCTTTGACAAAGCCACACCCCTTGAGTTCACACTGGTAGTGATTTATACCATTTCTAGAGTGTTTGAGGCTCTGGCTTTAAATGAGCCAGTGTTCGTTTGGCAAAGCCACGCCCCTTGGGCTTTTAAACATTATGAAAACCTTTAGAAAACATTCggaaataatgttttgaaactTATTGGGAACATCAGCACAACTTTCTATATCACTTATCAGGTCCCGAAAACGAAAAACGTTGAGAACCCCTCAATCAGACGAACTTCCTGACTGAGCTTCGCGAAGCACGTAAACCGAAGCGCTACAGCTGCGTTACGATCACTGTGGGATTTCGCTAGCATTCGCAATAGTGTTATGTTGTGACTCAGACAAGGAGCTTCGGCTCTAGCCTTGTATGTGGTGATGTTCAAGCACGGCCTTTTGGTAAAAACCACACCCCTTGATTTGAATGCCACGCCTCTTGAGTTCACACTGACAGTGATTCAAACCATTTCTGAAGTTTTTTTTGAGGCTCTGGCATCACGTTTGTCAATGTTAAGCCACGCCCGTTTGACAAAGCCACACCCTCAATGCAAACAACACTAAAAACTTGTGAATATTAGCGTGacgttttatatcatttataatgttgaGGACCTTCCTGATTGAGTTTGTGAAGCACATTGCTTTTGCATTACGGTCACTGTTGGATTCTGCTAGCATTGACTCGGGAAACGAGGAGCTTTGGCTCCAGCCTTGAACGTGGTTATGTTTAGCCACACCCCTTTGATAAAGCCACACCC
>XM_043247510.1
tgtgttttgttctccAAGTTCACTTTAGTTCTCGTCCCTCTCTCATCCTGCTTCCACGCGTTTGTTTCCGTGACGCGCGCGTGATGCGCACCGGGACTCGTGGATCAGACCGGCTCCGTGATTCAAAACCGCGCTTCGGATCGTAATGCTTCCAAAAGTTTTCCGCACCGGATTGAACTGCATGGAATAATGTGGCGAATCGTGCTGCTGTGCTGCGCTCTGGAGGCTTCCGTCGCGTCCCGTCCACCTGCGAACGCGTCTCTCCTCGCACCTGTCCGCGGCGTCGTGCGCACCGTGGACCGGATCTACCACGGAGGAGGGAAAGCCGGTTATCTTCTGTACATGGACGAGCGGCGCTTTCAGCTGGATATGGAGCGGGATGAGTCTCTACCGCCTCGTCGCTTCGGTTTGAACGCGGACGCGCCGTCGCGTCGGGAGTGCGTTTACCGCGGCACCGTCAACTCGAACGCGGAGTCGCTCGCGCTTTTCAATCTGTGCGGCGGCGGACTCGACGGCTTTTTTGCGGTGGATGACGCGCGGTACACCGTCACGCCGCTCATCCGAGCGAAGGGCCACGAGAACGACGCGTGCGTCGTCGAGGACGCAGACGCGACGCGCGCTCTCCACTACTACACGCGCGAGAGCTTCGGTTTCGAGGCGATGCCCGCGCGGCACAGCTGCGGCACGCGCGACCGCAGAGCGCGCAAGGCGCGGAAGACGCGACGCAAGCGCTCCGTGTCCCGCGCGCGGCACGTGGAGCTGCTGCTGGTCGCGGACGCGTCCATGACGAAGAAGTACGGCAAGGACCTGCAGCATTACCTGTTGACGCTCGCGTCCATCGCGTCCAAGCTCTACGGCCACGCCAGCATCGAGAACCCCATCCGCCTGTCGGTGGTCAAAGTCGCGGTCCTGTCCGAGAACGAGAAGGGCATCGAGGTGTCCAAGAACGCCGCCGCGACGCTCAAGAGCTTCTGCAAGTGGCAGAATCAGCAGAACCCCCTGGATGACGACCATCAGCATCACCACGACGCGGCGATCCTCTTCACCAGGCAGGATCTGTGCGGTCATCACTCGTGTGATACTCTCGGTATGGCTGATGTAGGAACTGTGTGTTCTCCGGAGCGGAGCTGCGCAATCATCGAAGACGACGGGCTTCATGCCGCCTTCACCGTGGCACACGAGATCGGGCACCTGCTGGGTCTGTCTCACGATGACTCTAAGTTCTGTGAGGAGCGTTTCGGTTCGACTGAAGACAAGCGGCTGATGTCTTCGATCCTGACCTCCATCGACGCGTCCAAGCCCTGGAGCCGCTGCACCTCCGCCACCATCACAGACTTCTTCGACGACGGAAATGCCGAGTGTCTGCTGGACGCTCCTCGAATGCCTCTCCTGGGTCCGGAGGAGCTTCCGGGTCAGAGCTATGATGCGGTGCAGCAGTGCCGGCTGGCCTTCGGCCCGGAGTACACTGTGTGTCCCGGGATGGACGTGTGTGCCCGTCTCTGGTGTGCCGTCATCAGGAAGGGTCAGATGGTGTGTCTGACCAAGAAGCTCCCGGCCGTGGAGGGAACGCCGTGTGGGAAGGGCCGGATCTGCCTGCAGGGGAAGTGCGTGGACAAAACCCGAAAGAGACACTACTCGACGTCCAATCACGGCAGCTGGAGCTCCTGGGGTCCGTGGGGCTCGTGTTCTCGCTCGTGTGGCGGCGGGGTCCAGTTCGCTCATCGTCTGTGTAATAACCCTCCTCCACGAAACAACGGCCGCTACTGCACCGGGAAGAGAGCCGTGTACCGCTCCTGCAGCGTCACGCCGTGTCCGTCAGCCGGTAAGAGCTTCCGTCAGGAGCAGTGCGAGCTACGAAACGGCCCTCAGACGGACCCTAAAGGGGTGAAGACCTTCGTGGAATGGGTGCCCAAGTTTGCCGGCGTGCTTCCCAAAGACATGTGCAAACTCACCTGCAGAGCCAAGGGCACGGGATACTACGTGGTGTTCTCCCAGCGGGTGGCTGATGGGACGGAGTGCCGGCCGTACAGCAGCTCAGTGTGTGTGAAGGGAAAGTGTGTTCGCACCGGCTGTGACGGGATCATCGGCTCTAAACTCCAGTATGATAAGTGCGGCGTCTGCGGCGGAGAAGGAAACAGCTGTATCAGAGTGGCTGGAAACTTCACCAAGAAGAGTAAGGGCTACACGGATGTGGTGAAGGTCCCCGAGGGCTCGACGCACCTGAAGGTCCGACAGTACAAGGCTAAAGGTCAGTCGCGCTACACGGCGTACCTAGCGCTTCGGCGGCCCGGAGGAGAATACCTGCTCAACGGGAAGTTCATGATCTCCACGTCCGAGACCATCATCCCTCTCAACGGCTCCGTTCTCAACTACACCGGCTGGAGCCAGCGGGACGAGGCCCTTCACAGCATGGGCCCCGGGGCCCTTCGGGAGAGCCTGGTGGTGCAGATTCTAGCCACGGACGCTAAGAAACCACTAGACATCCGCTACAGCTTCTTCATGCCACGCAAAATGCCGCTTCCACCACGAACGGTCGCCGCGGTTTCCGGAACCGCCGCGGCGCTGTCCTCGGCGGAGATCGTGACGTTTACGACGGACGTTCCCGTGACGACGGAGCCTCCGACGACAACGGCGCTCGCGGGGCCACGCTGGGTGACGGGGTCGTGGATGACCTGCTCCAGAACTTGCGATACGGGTTGGCAGAGTCGCACGGTGCAATGCAAGGACCCTCAGGGGAAGCTGTCCAAGAGCTGCCCGCTCAGCGCCCGGCCGTCAGCCTTCAAACACTGCCTGATCAAAAAGTGTTGAGGACCCCTCAATGTAGACGAACTTCCTGACTGAGCTTCGTGGAGCACGTAGACTGAAGCGCTGCAGTTGCGTTCCGATCACTGTGGGATTCTGCTAGCATTCGCAATAGTGTTGCGTTGTGACTCGGAACAAAGAGCTTTGCTTCGAGCCTTGAATGTGGTGATGGTTAGCCACGCCCCTTTGACAAAGCCACACCCCTTGAGTTCACACTGGTAGTGATTTATACCATTTCTAGAGTGTTTGAGGCTCTGGCTTTAAATGAGCCAGTGTTCGTTTGGCAAAGCCACGCCCCTTGGGCTTTTAAACATTATGAAAACCTTTAGAAAACATTCggaaataatgttttgaaactTATTGGGAACATCAGCACAACTTTCTATATCACTTATCAGGTCCCGAAAACGAAAAACGTTGAGAACCCCTCAATCAGACGAACTTCCTGACTGAGCTTCGCGAAGCACGTAAACCGAAGCGCTACAGCTGCGTTACGATCACTGTGGGATTTCGCTAGCATTCGCAATAGTGTTATGTTGTGACTCAGACAAGGAGCTTCGGCTCTAGCCTTGTATGTGGTGATGTTCAAGCACGGCCTTTTGGTAAAAACCACACCCCTTGATTTGAATGCCACGCCTCTTGAGTTCACACTGACAGTGATTCAAACCATTTCTGAAGTTTTTTTTGAGGCTCTGGCATCACGTTTGTCAATGTTAAGCCACGCCCGTTTGACAAAGCCACACCCTCAATGCAAACAACACTAAAAACTTGTGAATATTAGCGTGacgttttatatcatttataatgttgaGGACCTTCCTGATTGAGTTTGTGAAGCACATTGCTTTTGCATTACGGTCACTGTTGGATTCTGCTAGCATTGACTCGGGAAACGAGGAGCTTTGGCTCCAGCCTTGAACGTGGTTATGTTTAGCCACACCCCTTTGATAAAGCCACACCC

Function

symbol description
adamts5 Is expressed in several structures, including digestive system; eye; heart; pleuroperitoneal region; and thymus.

NR:

description
PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 5-like

GO: NA

KEGG:

id description
K08620 ADAMTS5; a disintegrin and metalloproteinase with thrombospondin motifs 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247501.1 True 3778 mRNA 0.58 8 2153236 2171533
XM_043247510.1 False 3763 mRNA 0.58 8 2153236 2171533

Neighbor

gene id symbol gene type direction distance location
gart gart coding upstream 191593 1942061 ~ 1961643 (+)
LOC122345473 LOC107751076,LOC107593744,LOC107698914,LOC100332351 coding upstream 211615 1937450 ~ 1941621 (+)
zgc:152904 zgc:152904,ncam2,LOC107698913,LOC107751079,LOC107721821 coding upstream 260040 1712042 ~ 1893196 (+)
LOC122343461 NA coding upstream 561306 1584612 ~ 1591930 (+)
LOC122347221 LOC107751081,LOC107698893,LOC107555241 coding upstream 569824 1574618 ~ 1583412 (+)
adamts1 adamts1,LOC107698918,LOC107751074,LOC107593742 coding downstream 6678 2178211 ~ 2184501 (+)
appa app,appa,LOC107698920,LOC107593741,LOC107751095,LOC103352860,LOC108232458 coding downstream 21388 2192921 ~ 2219736 (+)
atp5pf atp5j,LOC107751073,LOC107593738,LOC107698902 coding downstream 49355 2220888 ~ 2223969 (+)
LOC122351075 LOC107593736,LOC107698922,LOC107748323,LOC107665816,LOC107557261 coding downstream 82086 2253619 ~ 2260025 (+)
si:ch73-41e3.7 NA coding downstream 100445 2271978 ~ 2274222 (+)
G408 NA non-coding upstream 33845 2119116 ~ 2119391 (+)
G404 NA non-coding upstream 71416 2081472 ~ 2081820 (+)
G318 NA non-coding upstream 161469 1930657 ~ 1991767 (+)
G320 NA non-coding upstream 201916 1936173 ~ 1951320 (+)
G319 NA non-coding upstream 220092 1931816 ~ 1933144 (+)
G415 NA non-coding downstream 2789 2174322 ~ 2175616 (+)
G450 NA non-coding downstream 103474 2275007 ~ 2275341 (+)
G439 NA non-coding downstream 104459 2275992 ~ 2276271 (+)
G457 NA non-coding downstream 151752 2323285 ~ 2327330 (+)
G440 NA non-coding downstream 201182 2372715 ~ 2373156 (+)
LOC122327253 NA other upstream 711570 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 1032515 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1703596 445940 ~ 449640 (+)
G10 NA other upstream 1975036 177716 ~ 178200 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 14288 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 312107 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 322039 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 340039 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 352992 2524525 ~ 2527244 (+)

Expression


Co-expression Network