si:ch73-41e3.7


Basic Information

Item Value
gene id si:ch73-41e3.7
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2271978 ~ 2274222 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236657.1
CCACGCCCTCACGTCGATCAGAAACACCTGATCACACACGTGTCCGTCAGGAACCAGGATGCAGGAAAGCTCAGACTCGAGCCCGATTCAGTCCGACTTCCCGTACTCGTTTTCCGCCGACGGTCGCCTGCGCCACAGAGCGACCTCCGAACCCTACAGGTTCACGTTCAGACTGGACGACGTCCGCGGGACGGACCGGGAACACGGCGAGCTCTGCCGCTACATCACCCAGCACGTCTACCAGCTCCTCCAGAGGAGCTTCGGTCTGCTCCGGGTGCCGCTGGAGGACGAGGGGTTTGTGTTCGTGAGCCCGGGAGCGCTGGATCGTCCCGGGAGTCTCCTGCTTCTGATCCAGGACCGAGGGACGGTGCGGAGCGGCGTCTGGAGCTGGAAGCTGTCGGCTCACGAGGGACTGGAGCGAGGCAGTCAGATCCCGTACCTGTGCTGGGCGGCGCTGGAGTCCTGCGGCGTGATCGTCATGAACCCTAACGAGGGCGCGAGGACTCTGGAGCATCACGTGCGTTCGGTTTGGGAGCGCTTGGTTTCCCGGAGCGCCGCCGAGCACGTGCTTGTGGCCGCTCACGGATACGGAGGCCTGGGCTTCGTCGATCTTCTGTGTCACAATCCGGACGAGGTCCAGCGGCGGGTGAAGGCCGTGGCTTTCTTGGATTCGTCTCACAGTCTGTGGCATCAGCCGCTGGGGAAAGCCGGCCGGGACTGGCTGAAAGTGCACTCCAGGACGTGGATCCTGAGCAGCAAGCCTCTGAACCGCTCCGTCGGGTCGCTGAAGGCCGGGTCTCCGCAGATCTCCGCCGGCACCCGCTGCCACGACGCTGTGCCCGGCGTCTGCATGGAGTCTGTGCTTCGCTTCTTCAGCAGGAGCCTCAAACCCAGAGCCTCGGCGGCGCCGTCCGAGATCATCACCCGCAGCAAAAGCCGCAGAAACGACCAGAACCACAACCCCGTCTGACGGGTCCACACGCGCTCACATCTCGAATGAATAAATCACGCTGCATCAGAATGATGGTTTCTGTCTGATTGTCTGATAGTAGTAGTTTACCAAAATGTGAAATGATGACCCTCAGATCATCCCAGATCTGGAGGAgtgtgtctcagtaatggaagtgaatgggtgccgtcagaatgagagtctgataaaaacaccagAATAATCCGcagcactccggtccatcaggaGAAGACTGAACTCATCCagcatttagatattttaagcCTATAATCTATCATTTTAAACCCATtgtaattcataattaaacatGTGGCTGGTTGATTTTGACGTGAGAGACGAGGAGTGGCCCGTTTTCACTGGAAGAAGAATTagtggagtgctgtggattattctgatgctctcattctga
>XM_043236667.1
ACTTGTGTTCTTTGTCTTGATTATGCAGaatcttaattaaaatatctttctGTGACGAATGGTTGcctataaacatattttaaacagacacaaaccagtcaaaaatgtagaataataaatccttttcatgtttttgaagtcTCAGCATTGCAGTGGAAATTGTGAAATATGTGATTTACTGCTTGAGAAACATtcctgattattatcagtgcattctgaatcatctttgtggaaaccatgacgtactaccattcaaaattttgggGATGCAGGAAAGCTCAGACTCGAGCCCGATTCAGTCCGACTTCCCGTACTCGTTTTCCGCCGACGGTCGCCTGCGCCACAGAGCGACCTCCGAACCCTACAGGTTCACGTTCAGACTGGACGACGTCCGCGGGACGGACCGGGAACACGGCGAGCTCTGCCGCTACATCACCCAGCACGTCTACCAGCTCCTCCAGAGGAGCTTCGGTCTGCTCCGGGTGCCGCTGGAGGACGAGGGGTTTGTGTTCGTGAGCCCGGGAGCGCTGGATCGTCCCGGGAGTCTCCTGCTTCTGATCCAGGACCGAGGGACGGTGCGGAGCGGCGTCTGGAGCTGGAAGCTGTCGGCTCACGAGGGACTGGAGCGAGGCAGTCAGATCCCGTACCTGTGCTGGGCGGCGCTGGAGTCCTGCGGCGTGATCGTCATGAACCCTAACGAGGGCGCGAGGACTCTGGAGCATCACGTGCGTTCGGTTTGGGAGCGCTTGGTTTCCCGGAGCGCCGCCGAGCACGTGCTTGTGGCCGCTCACGGATACGGAGGCCTGGGCTTCGTCGATCTTCTGTGTCACAATCCGGACGAGGTCCAGCGGCGGGTGAAGGCCGTGGCTTTCTTGGATTCGTCTCACAGTCTGTGGCATCAGCCGCTGGGGAAAGCCGGCCGGGACTGGCTGAAAGTGCACTCCAGGACGTGGATCCTGAGCAGCAAGCCTCTGAACCGCTCCGTCGGGTCGCTGAAGGCCGGGTCTCCGCAGATCTCCGCCGGCACCCGCTGCCACGACGCTGTGCCCGGCGTCTGCATGGAGTCTGTGCTTCGCTTCTTCAGCAGGAGCCTCAAACCCAGAGCCTCGGCGGCGCCGTCCGAGATCATCACCCGCAGCAAAAGCCGCAGAAACGACCAGAACCACAACCCCGTCTGACGGGTCCACACGCGCTCACATCTCGAATGAATAAATCACGCTGCATCAGAATGATGGTTTCTGTCTGATTGTCTGATAGTAGTAGTTTACCAAAATGTGAAATGATGACCCTCAGATCATCCCAGATCTGGAGGAgtgtgtctcagtaatggaagtgaatgggtgccgtcagaatgagagtctgataaaaacaccagAATAATCCGcagcactccggtccatcaggaGAAGACTGAACTCATCCagcatttagatattttaagcCTATAATCTATCATTTTAAACCCATtgtaattcataattaaacatGTGGCTGGTTGATTTTGACGTGAGAGACGAGGAGTGGCCCGTTTTCACTGGAAGAAGAATTagtggagtgctgtggattattctgatgctctcattctga
>XM_043236672.1
CCTGATCACACACGTGTCCGTCAGGAACCAGGTCAGGATGCAGGAAAGCTCAGACTCGAGCCCGATTCAGTCCGACTTCCCGTACTCGTTTTCCGCCGACGGTCGCCTGCGCCACAGAGCGACCTCCGAACCCTACAGGTTCACGTTCAGACTGGACGACGTCCGCGGGACGGACCGGGAACACGGCGAGCTCTGCCGCTACATCACCCAGCACGTCTACCAGCTCCTCCAGAGGAGCTTCGGTCTGCTCCGGGTGCCGCTGGAGGACGAGGGGTTTGTGTTCGTGAGCCCGGGAGCGCTGGATCGTCCCGGGAGTCTCCTGCTTCTGATCCAGGACCGAGGGACGGTGCGGAGCGGCGTCTGGAGCTGGAAGCTGTCGGCTCACGAGGGACTGGAGCGAGGCAGTCAGATCCCGTACCTGTGCTGGGCGGCGCTGGAGTCCTGCGGCGTGATCGTCATGAACCCTAACGAGGGCGCGAGGACTCTGGAGCATCACGTGCGTTCGGTTTGGGAGCGCTTGGTTTCCCGGAGCGCCGCCGAGCACGTGCTTGTGGCCGCTCACGGATACGGAGGCCTGGGCTTCGTCGATCTTCTGTGTCACAATCCGGACGAGGTCCAGCGGCGGGTGAAGGCCGTGGCTTTCTTGGATTCGTCTCACAGTCTGTGGCATCAGCCGCTGGGGAAAGCCGGCCGGGACTGGCTGAAAGTGCACTCCAGGACGTGGATCCTGAGCAGCAAGCCTCTGAACCGCTCCGTCGGGTCGCTGAAGGCCGGGTCTCCGCAGATCTCCGCCGGCACCCGCTGCCACGACGCTGTGCCCGGCGTCTGCATGGAGTCTGTGCTTCGCTTCTTCAGCAGGAGCCTCAAACCCAGAGCCTCGGCGGCGCCGTCCGAGATCATCACCCGCAGCAAAAGCCGCAGAAACGACCAGAACCACAACCCCGTCTGACGGGTCCACACGCGCTCACATCTCGAATGAATAAATCACGCTGCATCAGAATGATGGTTTCTGTCTGATTGTCTGATAGTAGTAGTTTACCAAAATGTGAAATGATGACCCTCAGATCATCCCAGATCTGGAGGAgtgtgtctcagtaatggaagtgaatgggtgccgtcagaatgagagtctgataaaaacaccagAATAATCCGcagcactccggtccatcaggaGAAGACTGAACTCATCCagcatttagatattttaagcCTATAATCTATCATTTTAAACCCATtgtaattcataattaaacatGTGGCTGGTTGATTTTGACGTGAGAGACGAGGAGTGGCCCGTTTTCACTGGAAGAAGAATTagtggagtgctgtggattattctgatgctctcattctga

Function

NR:

description
protein FAM172A-like

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0044428 obsolete nuclear part cellular_component
GO:0044451 obsolete nucleoplasm part cellular_component
GO:0005634 nucleus cellular_component
GO:0005654 nucleoplasm cellular_component

KEGG:

id description
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236657.1 False 1379 mRNA 0.58 2 2271978 2274222
XM_043236667.1 True 1587 mRNA 0.53 2 2272046 2274222
XM_043236672.1 False 1358 mRNA 0.58 2 2272004 2274222

Neighbor

gene id symbol gene type direction distance location
LOC122351075 LOC107593736,LOC107698922,LOC107748323,LOC107665816,LOC107557261 coding upstream 11953 2253619 ~ 2260025 (+)
atp5pf atp5j,LOC107751073,LOC107593738,LOC107698902 coding upstream 48009 2220888 ~ 2223969 (+)
appa app,appa,LOC107698920,LOC107593741,LOC107751095,LOC103352860,LOC108232458 coding upstream 52242 2192921 ~ 2219736 (+)
adamts1 adamts1,LOC107698918,LOC107751074,LOC107593742 coding upstream 87477 2178211 ~ 2184501 (+)
LOC122350785 adamts5,LOC107751075,LOC107593743 coding upstream 100445 2153236 ~ 2171533 (+)
trmt10c NA coding downstream 2224 2276446 ~ 2281686 (+)
ercc5 ercc5,LOC104958986 coding downstream 11917 2286139 ~ 2296701 (+)
mettl21e zgc:92518,LOC107748343,LOC107665805 coding downstream 23000 2297222 ~ 2300404 (+)
LOC122345332 LOC107698899,LOC107751092,LOC107593812,LOC107580773 coding downstream 27519 2301741 ~ 2310388 (+)
rasa3 rasa3 coding downstream 59939 2334161 ~ 2371135 (+)
G415 NA non-coding upstream 96362 2174322 ~ 2175616 (+)
G408 NA non-coding upstream 152587 2119116 ~ 2119391 (+)
G404 NA non-coding upstream 190158 2081472 ~ 2081820 (+)
G320 NA non-coding upstream 320658 1936173 ~ 1951320 (+)
G319 NA non-coding upstream 338834 1931816 ~ 1933144 (+)
G450 NA non-coding downstream 785 2275007 ~ 2275341 (+)
G439 NA non-coding downstream 1770 2275992 ~ 2276271 (+)
G457 NA non-coding downstream 49063 2323285 ~ 2327330 (+)
G440 NA non-coding downstream 98493 2372715 ~ 2373156 (+)
G463 NA non-coding downstream 146254 2420476 ~ 2421647 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 79514 2185821 ~ 2192464 (+)
LOC122327253 NA other upstream 830312 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 1151257 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1822338 445940 ~ 449640 (+)
G10 NA other upstream 2093778 177716 ~ 178200 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 209418 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 219350 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 237350 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 250303 2524525 ~ 2527244 (+)
G482 dusp27 other downstream 320709 2594931 ~ 2596302 (+)

Expression


Co-expression Network