LOC122351075 (LOC107593736,LOC107698922,LOC107748323,LOC107665816,LOC107557261)


Basic Information

Item Value
gene id LOC122351075
gene name LOC107593736,LOC107698922,LOC107748323,LOC107665816,LOC107557261
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2253619 ~ 2260025 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247934.1
ttttgcattttttaagttAACCTAAGTTAACCAAATCTTGACTTGGTGGGTTTGGGGTTATGGGTTTTATTAAACAGCAGTAACTTCGTTTATTCTCTTTAATTGCTCACATCATGTGTCCCGTCGAAGAGATCTGCGCAATCCAGGGTAATTATAGCCAGCTAAAATCAGAACCGCAATGATTTGaaaggaaaataatattttaaaaacatacctcTGCTCTCTAACAAGTCAAAATCCTAGACCTAGATTTGCATTTTTCTGAACCGCCTCTAATCACACGCAATAAAGTCAGTAAATCAGTGCAGCACATGAATGAAGTACTATTAGCAAAGTACATTTAGATTGCAGTTTCATGCTTTCCATTAATGTTGCAATCAAGCCGAAAGGCATGCGTGAACCCTCCCACTGATAGGTTAAAGCCCAGAAACGCTCCCTCTGTGAGTTTTTACACTCCATCagcaacaaacacacatgcCAGAGCTCTCAGATCTCCAGGTCAATGCATGCAAGTCGACCACAGCCTCGTAAACAGAGAAATCATGTCTACCCTGGCGCCCATCACCTCGAATCAAACCAACTCCACCGCGTTCCCGAACGAGGGCCTGCGCGTGCTGCAGATGGTGCTGACCGTGGCCATCTTCGTCGTGGGCGTCTCTCTGAACGCTCTGGTGGTCTGGGCGTTGGGGGTTCGTGTCTGGTGCCGTAACAAAGCACTGTCGAGCGAAACGCAGAGCGCGGACAGCTTCCGGATCTACGTAGTGAACCTGGCGATCGCCGACTTGGTGCTGTTATTACGGACTCCGCTGATGCTGGCCTACTTGGCGAACAACTTCTCTTGGACCCTAGGGGAGCCCGTGTGCAAGCTGGTGATTTTTTTGCGATGCCTGGGATTGTACGCCAGTGCGTTTTTGCTGTGCGCCGTGGCGGTGGAGCGCTGCTTGTGTCTCCTCAGACCGGTCTGGGCTCGATTGAGACGCCCTCGCTGGATCGTGCCCGTGGCCTGCGCAGCGATATGGGTGTTGGCGGCGCTTTTCGGCGCTCCTTACATAACAACAGCTAAAGTCATTCTCTGGAATAACCATGACGCTTGCATCGAAAGCGATTTGGGAGTAGGACAAGCTTTAAATGTGTTGGAGACCGTGACAGGATTCTTGCTGCCTTTGGTGATCTTCATGTCGTGCAACATCGCAGTGATTTTTTGCGCAAAGAAAGCTGAGAGCACGGTGTCTTCCCCAACCTCGTCTTCCGGGCCGGGATACACTTCAAACCGCTTAAACCGTCTCTATCGCGTACTCTTCCTCACCATGCTCCTCTTCCTCACTTGCTGGGTGCCGTACTTCACCTGCCGCTTTCTGAGGGCGTTTTCTCACAATCGGCCCGAGTGGAAGGAGGTCAGGGAGCAGGCGATCGGCGCGGCGTACGTGGCGCTGTTTCTGGTTTACATAAAAAGCGCTCTCAACCCCGTCTTGTACGTGTTCGCGGCTCGAGGACTCGGGCGCAAGGTCCGGGCCTCGCTCGTCTCCACCATCGAGCGCGTCTTCAACGAGGAGCTGTCGGAGTCTTTGCGAAGAAAGTCTTTGCGAAGGAGGGACTCTGAGTTTTAGGATCGGAGGTTCCGGATCTGCTTGTGTGACAAACGATGGACGCTGACTACAAGCAGAAAACACTTCTGACTGAGGCCAAgtttatatttagtcatttagcagatgctttcatccaaGCGAGACAAACCAACAACCAGAATTTCGCAGAAGCCATTCTGTAACTGATATGATTGTTTCAATCTCAGATTTAATTGCGATGCATTGCATTTTAGGAACTTAACAGCAAATGCATTCAATGTCGTTCCATCCTGTGACTAAAGCTGGTCATTTCAGGCTTGATATAAAGCATTAAGAATGTTCTCATATATATTCAGTAGAAATGTGCCCTATACTCTCAGAGATAAAGGCACTTTTGTACCCTTTAGATACTAATATGTACATCGCTTGAATAAATTGTGGTACAAATGTGTGCCTGCTGTCCTGTCTGTTATTTTTATCTGAGAGTGTACATAGAACTTTTTCACCAAGattattaacaaacattaaaaacaaaagccttACTGTAACcgatgttattgttttaatcttGGATTTATTTGTGACGCACTGCATTTGCAATTAAGGCTTTCTTCATGTTACTAAAGGCCgctcattttaaagaatgtactTTCGTATTATGCAAAAGAAACGTGTTGTACTAATGA
>XM_043247943.1
CCGGAGCCCTTGATGTACGGTTTGTTAGGATACGACAACATCtggccaagatacaactatttgaaaatctggaaacgGGAGAAAAATAATTGTCACAGTTCAAGTTTTCACTCCTGAGATCCTGTGTTTAATCCAGGAATCTAAGTCTACTACCTATTGGCTTGATCCTTTACCAAACGTCTGTTGatcatctttatttccattatttattacaatcaTTAACTTACTCGTTTGGGGTTCTGTACGTTCCTCTAAAATCTGCTGCCTTAAAGGGTTTCGATTTGGAATTAGCCTGGTTTATGTTCATCTCAGTCTCTGGTTGCACTTAGTCCGTTCAAATTAAACCTAGAAGATGAAGATCTTCCACTGCAGGTGTTCCTCAGGGTTCTGTCTTGGGCCCGTTTTTACTTTCATTCCCACTTATATCTATATGAAATATGGTATTCAGTTCTCTCCGCGTCTTCTAAAGCCTTTGACCAGATGTTTAGCAGAAATCAAAGCTAAACTCAACGGCAAAAAAACCACACAAGCTCCACTTTAACAAAACCTGATTGTATTTCCGCGGATATGATGCATGTTTTTAAGTTGTGCATGCTAAAtgaagttttgaaatgtttatggtaaatatcttaatggaacataatctttacttaaAAGCCAACGActtttggaataaaagaaaaatgtattgctgGCCATTGCTACTAATAAACCTGCGCTGCtgatgactgcttctgtgctgCAGGGACACCCACTGGAAACACCGAAACACACACCATGTGAGAACACAGAAGAAACGAATTCTCACAGAAAGTGGTAGAAATGAGCAAGCCACAGGAGCTTCACTCAAACTAACACATCTGAAAACTGCTGAGTTGAATCTTGTGGTTGCGAGATAAGGAAGTTTGAGTCGGACTGAGCTCGATGACGCAACGCACATGTTCACTTCAACACTTATGACACGGACAGAAAGCAGACAAGCCTCTGCTGGTTTCAGCTCAGTCCTAGTGCAATCTACACCTGATTAATGAGTCCTCACTGCTTTAACAGCAGAGCCCACTAAGAGAAATCATGTCTACCCTGGCGCCCATCACCTCGAATCAAACCAACTCCACCGCGTTCCCGAACGAGGGCCTGCGCGTGCTGCAGATGGTGCTGACCGTGGCCATCTTCGTCGTGGGCGTCTCTCTGAACGCTCTGGTGGTCTGGGCGTTGGGGGTTCGTGTCTGGTGCCGTAACAAAGCACTGTCGAGCGAAACGCAGAGCGCGGACAGCTTCCGGATCTACGTAGTGAACCTGGCGATCGCCGACTTGGTGCTGTTATTACGGACTCCGCTGATGCTGGCCTACTTGGCGAACAACTTCTCTTGGACCCTAGGGGAGCCCGTGTGCAAGCTGGTGATTTTTTTGCGATGCCTGGGATTGTACGCCAGTGCGTTTTTGCTGTGCGCCGTGGCGGTGGAGCGCTGCTTGTGTCTCCTCAGACCGGTCTGGGCTCGATTGAGACGCCCTCGCTGGATCGTGCCCGTGGCCTGCGCAGCGATATGGGTGTTGGCGGCGCTTTTCGGCGCTCCTTACATAACAACAGCTAAAGTCATTCTCTGGAATAACCATGACGCTTGCATCGAAAGCGATTTGGGAGTAGGACAAGCTTTAAATGTGTTGGAGACCGTGACAGGATTCTTGCTGCCTTTGGTGATCTTCATGTCGTGCAACATCGCAGTGATTTTTTGCGCAAAGAAAGCTGAGAGCACGGTGTCTTCCCCAACCTCGTCTTCCGGGCCGGGATACACTTCAAACCGCTTAAACCGTCTCTATCGCGTACTCTTCCTCACCATGCTCCTCTTCCTCACTTGCTGGGTGCCGTACTTCACCTGCCGCTTTCTGAGGGCGTTTTCTCACAATCGGCCCGAGTGGAAGGAGGTCAGGGAGCAGGCGATCGGCGCGGCGTACGTGGCGCTGTTTCTGGTTTACATAAAAAGCGCTCTCAACCCCGTCTTGTACGTGTTCGCGGCTCGAGGACTCGGGCGCAAGGTCCGGGCCTCGCTCGTCTCCACCATCGAGCGCGTCTTCAACGAGGAGCTGTCGGAGTCTTTGCGAAGAAAGTCTTTGCGAAGGAGGGACTCTGAGTTTTAGGATCGGAGGTTCCGGATCTGCTTGTGTGACAAACGATGGACGCTGACTACAAGCAGAAAACACTTCTGACTGAGGCCAAgtttatatttagtcatttagcagatgctttcatccaaGCGAGACAAACCAACAACCAGAATTTCGCAGAAGCCATTCTGTAACTGATATGATTGTTTCAATCTCAGATTTAATTGCGATGCATTGCATTTTAGGAACTTAACAGCAAATGCATTCAATGTCGTTCCATCCTGTGACTAAAGCTGGTCATTTCAGGCTTGATATAAAGCATTAAGAATGTTCTCATATATATTCAGTAGAAATGTGCCCTATACTCTCAGAGATAAAGGCACTTTTGTACCCTTTAGATACTAATATGTACATCGCTTGAATAAATTGTGGTACAAATGTGTGCCTGCTGTCCTGTCTGTTATTTTTATCTGAGAGTGTACATAGAACTTTTTCACCAAGattattaacaaacattaaaaacaaaagccttACTGTAACcgatgttattgttttaatcttGGATTTATTTGTGACGCACTGCATTTGCAATTAAGGCTTTCTTCATGTTACTAAAGGCCgctcattttaaagaatgtactTTCGTATTATGCAAAAGAAACGTGTTGTACTAATGA
>XM_043247951.1
ttttgcattttttaagttAACCTAAGTTAACCAAATCTTGACTTGGTGGGTTTGGGGTTATGGGTTTTATTAAACAGCAGTAACTTCGTTTATTCTCTTTAATTGCTCACATCATGTGTCCCGTCGAAGAGATCTGCGCAATCCAGGGTAATTATAGCCAGCTAAAATCAGAACCGCAATGATTTGaaaggaaaataatattttaaaaacatacctcTGCTCTCTAACAAGTCAAAATCCTAGACCTAGATTTGCATTTTTCTGAACCGCCTCTAATCACACGCAATAAAGTCAGTAAATCAGTGCAGCACATGAATGAAGTACTATTAGCAAAGTACATTTAGATTGCAGTTTCATGCTTTCCATTAATGTTGCAATCAAGCCGAAAGGCATGCGTGAACCCTCCCACTGATAGGTTAAAGCCCAGAAACGCTCCCTCTGTGAGTTTTTACACTCCATCagcaacaaacacacatgcCAGAGCTCTCAGATCTCCAGGTCAATGCATGCAAGTCGACCACAGCCTCGTAAACAGATGAGCGACGCTGTAGGCGTGTACGCGTGCAAGGAATGCATTATGGATGTGTGTAAACAGGTCGTGGACGGGAGGACATCTGTGGGTGAAATAATCCCACGCCTTCAGAGAAATCATGTCTACCCTGGCGCCCATCACCTCGAATCAAACCAACTCCACCGCGTTCCCGAACGAGGGCCTGCGCGTGCTGCAGATGGTGCTGACCGTGGCCATCTTCGTCGTGGGCGTCTCTCTGAACGCTCTGGTGGTCTGGGCGTTGGGGGTTCGTGTCTGGTGCCGTAACAAAGCACTGTCGAGCGAAACGCAGAGCGCGGACAGCTTCCGGATCTACGTAGTGAACCTGGCGATCGCCGACTTGGTGCTGTTATTACGGACTCCGCTGATGCTGGCCTACTTGGCGAACAACTTCTCTTGGACCCTAGGGGAGCCCGTGTGCAAGCTGGTGATTTTTTTGCGATGCCTGGGATTGTACGCCAGTGCGTTTTTGCTGTGCGCCGTGGCGGTGGAGCGCTGCTTGTGTCTCCTCAGACCGGTCTGGGCTCGATTGAGACGCCCTCGCTGGATCGTGCCCGTGGCCTGCGCAGCGATATGGGTGTTGGCGGCGCTTTTCGGCGCTCCTTACATAACAACAGCTAAAGTCATTCTCTGGAATAACCATGACGCTTGCATCGAAAGCGATTTGGGAGTAGGACAAGCTTTAAATGTGTTGGAGACCGTGACAGGATTCTTGCTGCCTTTGGTGATCTTCATGTCGTGCAACATCGCAGTGATTTTTTGCGCAAAGAAAGCTGAGAGCACGGTGTCTTCCCCAACCTCGTCTTCCGGGCCGGGATACACTTCAAACCGCTTAAACCGTCTCTATCGCGTACTCTTCCTCACCATGCTCCTCTTCCTCACTTGCTGGGTGCCGTACTTCACCTGCCGCTTTCTGAGGGCGTTTTCTCACAATCGGCCCGAGTGGAAGGAGGTCAGGGAGCAGGCGATCGGCGCGGCGTACGTGGCGCTGTTTCTGGTTTACATAAAAAGCGCTCTCAACCCCGTCTTGTACGTGTTCGCGGCTCGAGGACTCGGGCGCAAGGTCCGGGCCTCGCTCGTCTCCACCATCGAGCGCGTCTTCAACGAGGAGCTGTCGGAGTCTTTGCGAAGAAAGTCTTTGCGAAGGAGGGACTCTGAGTTTTAGGATCGGAGGTTCCGGATCTGCTTGTGTGACAAACGATGGACGCTGACTACAAGCAGAAAACACTTCTGACTGAGGCCAAgtttatatttagtcatttagcagatgctttcatccaaGCGAGACAAACCAACAACCAGAATTTCGCAGAAGCCATTCTGTAACTGATATGATTGTTTCAATCTCAGATTTAATTGCGATGCATTGCATTTTAGGAACTTAACAGCAAATGCATTCAATGTCGTTCCATCCTGTGACTAAAGCTGGTCATTTCAGGCTTGATATAAAGCATTAAGAATGTTCTCATATATATTCAGTAGAAATGTGCCCTATACTCTCAGAGATAAAGGCACTTTTGTACCCTTTAGATACTAATATGTACATCGCTTGAATAAATTGTGGTACAAATGTGTGCCTGCTGTCCTGTCTGTTATTTTTATCTGAGAGTGTACATAGAACTTTTTCACCAAGattattaacaaacattaaaaacaaaagccttACTGTAACcgatgttattgttttaatcttGGATTTATTTGTGACGCACTGCATTTGCAATTAAGGCTTTCTTCATGTTACTAAAGGCCgctcattttaaagaatgtactTTCGTATTATGCAAAAGAAACGTGTTGTACTAATGA

Function

NR:

description
PREDICTED: C3a anaphylatoxin chemotactic receptor-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247934.1 False 2251 mRNA 0.47 2 2254700 2260025
XM_043247943.1 True 2780 mRNA 0.46 2 2253619 2260025
XM_043247951.1 False 2359 mRNA 0.47 3 2254700 2260025

Neighbor

gene id symbol gene type direction distance location
atp5pf atp5j,LOC107751073,LOC107593738,LOC107698902 coding upstream 29650 2220888 ~ 2223969 (+)
appa app,appa,LOC107698920,LOC107593741,LOC107751095,LOC103352860,LOC108232458 coding upstream 33883 2192921 ~ 2219736 (+)
adamts1 adamts1,LOC107698918,LOC107751074,LOC107593742 coding upstream 69118 2178211 ~ 2184501 (+)
LOC122350785 adamts5,LOC107751075,LOC107593743 coding upstream 82086 2153236 ~ 2171533 (+)
gart gart coding upstream 291976 1942061 ~ 1961643 (+)
si:ch73-41e3.7 NA coding downstream 11953 2271978 ~ 2274222 (+)
trmt10c NA coding downstream 16421 2276446 ~ 2281686 (+)
ercc5 ercc5,LOC104958986 coding downstream 26114 2286139 ~ 2296701 (+)
mettl21e zgc:92518,LOC107748343,LOC107665805 coding downstream 37197 2297222 ~ 2300404 (+)
LOC122345332 LOC107698899,LOC107751092,LOC107593812,LOC107580773 coding downstream 41716 2301741 ~ 2310388 (+)
G415 NA non-coding upstream 78003 2174322 ~ 2175616 (+)
G408 NA non-coding upstream 134228 2119116 ~ 2119391 (+)
G404 NA non-coding upstream 171799 2081472 ~ 2081820 (+)
G320 NA non-coding upstream 302299 1936173 ~ 1951320 (+)
G319 NA non-coding upstream 320475 1931816 ~ 1933144 (+)
G450 NA non-coding downstream 14982 2275007 ~ 2275341 (+)
G439 NA non-coding downstream 15967 2275992 ~ 2276271 (+)
G457 NA non-coding downstream 63260 2323285 ~ 2327330 (+)
G440 NA non-coding downstream 112690 2372715 ~ 2373156 (+)
G463 NA non-coding downstream 160451 2420476 ~ 2421647 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 61155 2185821 ~ 2192464 (+)
LOC122327253 NA other upstream 811953 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 1132898 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1803979 445940 ~ 449640 (+)
G10 NA other upstream 2075419 177716 ~ 178200 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 223615 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 233547 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 251547 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 264500 2524525 ~ 2527244 (+)
G482 dusp27 other downstream 334906 2594931 ~ 2596302 (+)

Expression


Co-expression Network