fgfrl1b (fgfrl1b,LOC107740189,LOC107680949,LOC107593239,LOC107724828,LOC107688696,LOC105908136)


Basic Information

Item Value
gene id fgfrl1b
gene name fgfrl1b,LOC107740189,LOC107680949,LOC107593239,LOC107724828,LOC107688696,LOC105908136
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 23918709 ~ 23946775 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256649.1
ATTCACAGCTGTAGATCTTCAGTTCTCTCCACGGTCAGGGATGCTGACGGGTCATGTCAAGAGAAGAGGCGAGTGGAACCTAAGTAACGTTACTGACTTTGTTCTTCTCCTGgacagaatacaaaaaaaaaaaaaaaaatctgaagactGTTCGAGAGCGTTCGTCTCCATCCCTCTATTAGAAACCGATTAACTCACAATAATAAATCGCCATCGGCGGACATTTGCGGGTCATCATAAAATGTTTCCAGAGAGAGGAAGCTTGACTTTTCTCACTGTGGTTTTGATCGTGGCGTTATCATGTGAAGCGAGAGGTCCTCCATGGGTGAGTCGTCAAGTAGAGTACAGACAGACAGCAAAACTGGGTCGCACTGTTCGACTTCCATGCCCGGTGGAGGGTGACCCCCCTCCTCTGGTCCTGTGGGTGAAGGATGGGCGGAACGTGAATCCAGCCTGGAGCCGCTACAAGGTTCTGAAGCAGAGTCTGAAGATCAAAGAAGTGGAGCTGGAGGATGCCGGCGTGTACATCTGCCGCGTCACCAATGGATTTGGCAGCCTCGCCCTCAACTTCACACTCATTGTAATTGATGATGCAGCTGTGACTCAGAACCAGCCTCCTCCAGACGCAGCAGAAGCGAACGCTGATCTCACCCTGCAGGACCCTACCGGAGAGCCATGGGTGAAGCCACGCTTCACTCAGCCCACAAAGATGCGCAGGCGTGTGCTGGAGCAGCCCGTCGGCAGCTCGGTGCGTCTCAAGTGTCTGGCCAGTGGCAATCCAACACCGGTCATTACATGGTGGAAAGACCAGAGCCAGCTGCCCAGCCCTCACCAGAGTAGACGGCCGCAGTGGACACTGACTCTGAAGAACCTGCAGCCTCAGGACAGTGCCAAATACACCTGTCACGTCTCCAATGCAGCCGGCCATATCAATGCCACCTACAAAGTGGATGTAATTGAGCGTGCCAACTCCAAACCCATTCTGACAGGTACCCATCCTGTCAACACGACTGTGGAGTTTGGTGGAACAGCTTCCTTCCAATGCAAAGTCCACAGTGATGTAAAGCCCGTGATACAGTGGCTGAAGAGAGTGGACCCAGGCACAGAGGGGCGTTATAACTCCACGCTGGAGGTAGGAGGACAGCACTTTGTGGTGCTGCCCACCGGAGACGTGTGGTTCAGACCTGACGGTTCCTACCTCAACAAGCTGGCTATCGTCAAGGCGCGTGACGAGGATGCTGGAATGTACATATGTCTAGGAGCGAATACCATGGGCTACAGCTTTCGCAGCGCCTACCTCACTGTTCTCTCAGATCCCAAGGTGGATAAGGACGTCATTCCCCGCCACATCAGCCCCGGTCTTCCCTGGCCGCTGATCATTGGGATCCCAGCTGCCGCCCTTCTCATCGTAGGAGCCATCGTGCTCTGGTTGTGCCACAGCCGCAGACGCCAGAGCGCTTTACCTCCCCGGCCGACAACCTATCGAGACCACCACATTCCAGACAAGGAGCCCAGCACGGCCAGCGGCCTCAACCCTGACCTGCCCAACCAGAGACTAATGGGTATGGGGCCCCCAGCTCTCAGCGGTCCTCCGAAGATTTATACCAAGGTCtacacagacatgcacactcacacccacacacactcccaTGCACACATGGAGGGGAAAGTACACCAGCATTTCCATTACCAGTGTTAACATGTTACCATCGGGTAACCCATGCTGCTGCCTCTGTTCTCGTGAGCTAAGGGCCACCACCCGAGGACCACAACCGTACTGTTCTGATGGAGCCCATTTACCTTGAAGTGTCTCAGGTCAAGGAAAATAGAGCTGCAGTGGACCTCGGGTTTCCTTTAGGTGCTTCGGAGTTCAAAATCAAATAACACTGAATCAAAGCAACCCGAGCAACTGCTAACAATCCAAGAACAATACTTTTGCTATTCAAAAGCCAAGCATTACACGGGAAGTAAAGCagagatattttatatttggagAAACTGTGATGATCTGTGTTAAGCATATACTGTTGGCCCTGTTTACAATGTATTCTGTCAGTTAATGAGCAGAgatgtggtgttttttttttgtttttttttctcgtttgtTTTTTGTATCGCAACATTATATTGTGAAGAAATTATGCAAGGAAATGTCAGGGAATATAGACGGATGAGTAAATGGAAAGGGGGTAAGGGCTTCTGTTGTATTAACATTAAAAGGTACTTTGCGTGTATGTATTCAGCTCAACTTTCTGACGTTTGCAGTATTACGTAACGTACAATCTCTCTTTGCCAATTCAGTCTCACTGTTTGCTAATTACAGTCGAGGGaagctattttatttcaaacgcATCGTGTATCACCTCGACTTACAGATGAGCTGTAAACATGGCATTGCTGTTTGAcgataatacatatatattaagaCTCCACCAAAAGCTAGTCCGCAGGGTCTTTAGAAACCCCTTGTGAGCCGATACACAAATCTctttaaaatctataaatgtGACATGTTTATACTGCATGCTGCGATTTTTACTTTGGTGCTCATGTAAgtgtattttattgatatttttgtaagaaataaataattttctattttccCCCATGCGTTTTACAGTTTGACCCCCAAAGTGTCGCGTGTTTTGTGTGGGAACTGAGCGCTGGATGCCCCGGCAGCGGCTGTTGACTCTCCTCACCCTCCCTAACACGGCCTCAGACCACTGTTAGTTCAACAGGCTGAGGAATGCAATGAGAAAATCAAGTTATTCTTTTCGACACCGGGAAAGGAGGGAAATATTCCCAGCAGGATTCGATGGGTATTAATATTCGGATAGGGTTACGAAGAGGGGGCTACGGTTCTTTAGGTTGTTTCCTCTGGGTTCCCTGTGGatgacaaaagcaaaaaaaactctCAGGCGACACCGAACGCCCCGGAGGAGACTGAGCACTGGACATTTGAActacaaggaaaaaaaaaatgggttagactgtttaaatgtaatgaatcaATTGAGGAAAATTGAGGAATTCGGTACCTGCCAATTGTAGGGTAATGCAGATCCAGATCAAATGCTCTGCTGCCATCTAGGGGCCATAGTTGAATCTGTTTAAACAATCTCTGAgctcaaactaaaaaaaaaaatgctgtaaagcGATAGCTTTAAtatgataattaataatgtgATTTTACAAAA

Function

symbol description
fgfrl1b Predicted to enable fibroblast growth factor binding activity and fibroblast growth factor-activated receptor activity. Acts upstream of or within cartilage development. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including digestive system; endoderm; mesoderm; nervous system; and vasculature. Orthologous to human FGFRL1 (fibroblast growth factor receptor like 1).

NR:

description
PREDICTED: fibroblast growth factor receptor-like 1

GO:

id name namespace
GO:0051216 cartilage development biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005515 protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256649.1 True 3197 mRNA 0.48 7 23918709 23946775

Neighbor

gene id symbol gene type direction distance location
pcdh10b pcdh10b,LOC107586058,LOC107730674,LOC107756512,LOC107570452,LOC107680982,LOC107678866 coding upstream 460159 23446370 ~ 23458550 (+)
eif4ea eif4ea,LOC107696296,LOC107730661,LOC107680975 coding upstream 652190 23262084 ~ 23266519 (+)
adh5 adh5,LOC107730660,LOC107586060,LOC107680974,LOC107696300,LOC107756510,LOC103043395 coding upstream 656981 23258039 ~ 23261728 (+)
gar1 gar1,LOC106513240 coding upstream 661438 23254487 ~ 23257271 (+)
lect2.1 LOC107669062,LOC107692812,LOC107567336,LOC107562820,LOC107740129,LOC107723827,LOC107562821 coding upstream 1145381 22771046 ~ 22773328 (+)
itga6l LOC107680984,LOC107740164,LOC107593233 coding downstream 32236 23979011 ~ 23990098 (+)
tspan7 tspan7,LOC107680992,LOC107688694,LOC107724838,LOC107560449,LOC107740175,LOC107593221 coding downstream 70147 24016922 ~ 24021170 (+)
mid1ip1l mid1ip1l,LOC107680990,LOC107740162,LOC107593217,LOC107560451,LOC107688693,LOC107724839 coding downstream 74884 24021659 ~ 24023618 (+)
trnav-uac_6 NA coding downstream 104928 24051703 ~ 24051775 (+)
cstf2 cstf2,LOC107740160,LOC107680996,LOC107688691,LOC107724843 coding downstream 107931 24054706 ~ 24063276 (+)
LOC122357577 NA non-coding upstream 560017 23267299 ~ 23358692 (+)
G101784 NA non-coding upstream 1157071 22761292 ~ 22761638 (+)
G101761 rnf130,LOC107723823,LOC107740126,LOC107682892 non-coding upstream 1188478 22723934 ~ 22730231 (+)
G101756 NA non-coding upstream 1320754 22597686 ~ 22597955 (+)
G101746 NA non-coding upstream 1352011 22566171 ~ 22566698 (+)
LOC122358238 NA non-coding downstream 2382 23949157 ~ 23950565 (+)
G102019 NA non-coding downstream 323276 24270051 ~ 24270368 (+)
G102068 NA non-coding downstream 630413 24577188 ~ 24577506 (+)
G102069 NA non-coding downstream 631428 24578203 ~ 24578529 (+)
G102143 LOC107680971 non-coding downstream 1143737 25090512 ~ 25693470 (+)
neil3 neil3 other upstream 1330176 22584190 ~ 22588533 (+)
gria2b gria2b,gria2,LOC107554451,LOC107723812,LOC107740107,LOC107669079,LOC108411138,LOC107662960 other upstream 1607868 22282291 ~ 22310841 (+)
LOC122357535 wnt8-2,LOC107669112,LOC107743919,LOC107752032,LOC107602559,LOC107664333,LOC107568688,LOC106604410 other upstream 2151378 21765641 ~ 21767331 (+)
tmsb2 NA other upstream 2159162 21757456 ~ 21759547 (+)
apln NA other upstream 2475011 21422712 ~ 21443698 (+)
nitr14b NA other downstream 23377 23970152 ~ 23972249 (+)
tmem35 tmem35a,tmem35,LOC107680989,LOC107740187,LOC107724834,LOC107688707 other downstream 139949 24086724 ~ 24089522 (+)
G102017 LOC107680957,LOC107593209,LOC107740154,LOC100534741 other downstream 269468 24216243 ~ 24216763 (+)
LOC122358267 LOC107593202,LOC107740141,LOC107680337,LOC107554835,LOC108268827,LOC105904295 other downstream 1110977 25057752 ~ 25059200 (+)
G102332 wdtc1,LOC107738793,LOC107673335 other downstream 2086204 26032979 ~ 26035638 (+)

Expression


Co-expression Network