tex11 (tex11)


Basic Information

Item Value
gene id tex11
gene name tex11
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 21139957 ~ 21151490 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257178.1
TTCGCGTGCAGCGCGTGCGGGCGTGTTTTTGGCGGGAACGCTCGCGAGGGGTCGTGGTTCCGTCACTAAAACGctgacaaaatatatttcacagttttaagTTACGTTAGAATATACAGACATGACCGTAATATGGAGCAGTTCGTAGTCGACGTAAAAAACCTGTCAGAGCAGCTTCTCCACAGACAGGTGGACTCGAGTTTGGATGAGGTGATTGAGTCCCTCTTTAACTCGATATCAACTCTAGATGCAGCTGCAAAACTACAGGATGCTCAGTTGGAGGACATCGCCATACAGCTTTGGAACTGGGCAGTGACCAAACGTGTCGGCTCAACTATTACAGAAGAGCAAAAGGCCAAAGTGCGTCATGTGGCATGCAGACTTCTGTATTCATGCGGCCCTGAAAACCCATCAGAGAATATTGTTCGCAAGCAGATACTGATGGCAAGTAAAACAGGACGAACATGGCTTGATTGCAAACGACCCAAAGTCGCTGATGATTTTTTGAGCCTTGCTGTCAATAGCCTGGAGACTCTTTACAGCAGACTCGCTTCCCATGGAGATTTTGCAGAAGATATGAACACACCAAAGGGAGACGTAGAGAAAGACCTGCTCCGGGTTTTGTCATACAAAGCTGAATCTGCAGTTTCTCAAGAACAACATCAAGAGGCAGTGTCAAACGTACAGCGGTGTAAAGAAATGCTTCTGCGTCTCCCTAAAGAGACTGgctatctctctctcacctgtTACAACTTTGGGATTGAAACTTACAGTCAGGGAAAGCATGAAGAGAGCACATTTTGGCTAAGcCAAAGTTATGATATAGGCAAGATGAGTGTGAAGTACTCACCAGGATCAGAGATGCAAGCCAAAGTTTTGAGACTTCTTGCAAAGGTTTATTTGGAGTGGGACTGTCAGAAGTACCTGGAGAAAGCTCTTCATGCTGTGTGCTTGGCTAATAAAGAGCATATGCATTTGTCAGGCTTGCATTTAAAGATTCGTATCCTAATTAAAAGCCACAGCTCAGATGAGGCAATAAAATCTGGGCTGTTAGAGCTACTGGACTGTGAGGTTCCTCTGGAAGTGTGCTTGAGCACAGTAAAGCTGCTCATGGGAGAGAACAGGGAGGCTCTGGCCTTTGACTTCCTGAAGAGGGTGTGTCTGCATTTTGATTCATCTCCTGAACTGGGTTCTGCTCTGCTCATGCATATAGAGCTGCTGCTGCAGCAGGGCAAAGACCTGCTGGCCAAGCAGAAGATTGAGGATGCTATCACGGGACATTACACTGGAAAACAACTGGAACCTCAGACCCTGTCATCTCTCCACCTTCTTCTGTGGGATAGAGCTTCCAAAAACTTTGAAGCCAAGAACTATTCTGAAGCTCTGGAATGGTATAACTACTCACTGAGCTTTTACAGAGCAGACGAGTTGGATCAAAATCTTGCTAAACTGCAAAGAAACCGATCCACCTGTTTCCTGCACCTGCGTCAGCTTGAGAAGGCCAAAGACGCTGCAGAAAAGGCAGCAAGGATTGATCCATGCAACATTTTTACACAGTTCAACATCTACAAGATCGCTGTACTAGAAAACGATGCGGAGAAGGCTGCTGTGGCTCTGAGAGAGATTGGCGCTCTGGCTCAGAATCCGGTCCCCAGCGAGGACAGACTGCTAGTGACTGAAAACGCCGCTGCAAACCTCCTCAGCCTGGCCGCACACATCGCCCTCGAGCATGAGCAGCAGGAAACAGCCATCAGAGCcctagagagtgtgtgtgaacacTCACAAGATGTTCCTCAAATCCTCACTGCCTTGAGGTGTTTAGTACGACTTGTTCTGACAACAATGGAAAACATCAGTGAGGAAACCAGGAGTCCCAACTCAGATATCCTCTTGTCATACCTgaaaaaagCTCTTGAGAAATTATCACAAATCAGCCAAGGAGCACAGCAACATTCAGAAGACGCCAACTGGTTCAGGAGAATCGcGTGGAACTCAGCCCTGCAGTGTGAGCACAGCCCTGTGAGGATGAGGGATTTCTTCCTTCTCTCCTTCCAGCTGTCACAGCTGTGCGCCGCAGACAGAGGGGTGTTGATGGGGCAGAAGACGTGTCTGCTGATGGCTGCTGCTGCATCTCTGGAGGTCTGCAGGAGATCTGATCACACTGAGCAACAGACCGAGCTCCTGACCCAGACTCTAGAGCACATTCAGCTCTGTAAAGAGATCTGGACGACCATCAAAGCTTCAGGCACTTCCTCCAAAGACAGAACAGACACATTATTGCTGCTCTATGAGTTTGAAGCCCGGGCCAAATTAAATGATCCAAAGCTTGAATCTGTGTTTGAATCAGTTTTAGAACTGGATTGCATTGAGGCCAAGCTGCTAGAAATGATCGCAGTCCTGGCGATGGAAGCACCGGCTCATTCCCCTGCTCTGTGTAAGAAAGCACTGAGGATCGCCTTGTCTCTGCACAGAAAACAGCCAGAGGTCGACCTTACACGCTGCAGTAACTGCTTGCACAGCCTGATTCAGCTGACCCTGCCGAGCGGCGTGTCTGAGGTGCAACCCTGCATGCTGGAGGAAGTGTGGGGTTACTACGAGGAAGCTCTTTCCATCGTAGCAACCGCACCCGTGGACTTTCCAGAACTGGAGATCCTGTGGCTGCTGACCCGAGCGTGGAATACGGGAATCCTGCTCTACAGTCTGGCCCAGTATCCCGAGGCCGAGAGGTGGTGTGGGCTGGGAATGAGCTTCCTGAAGCACCTGGGCTCCCTGCAGGACAGCTATCACTCTCAGATGGCGGGTCTGTACAGTGAGGTGTTGGACAGGCTGGATAAAGCCAAGAAGAATCTCATTATTGAGGAGTGAATGATGGCTTCAGTCGCAGATGGAGATCTCAGGTCTAACGGCACGTGTTTAATATGTAGTGTGAatttctgtgcatgtttttgagACGCTAAGAGATGAGGGGGTTTGTCGGTACGGTTATGAAATGgttcatatattcatttaatctGAAATACGTTTTggcagtattattttattacctgTCATCCGGTTATCTGTTTTGAGCTGTTCTCGGTCGACTAGTTCAAAACATCTGCATTGcgatacaaaacaaataaaaatgcatgcattgaaATCGTAACAGAGTCACATAGTTTATTTCCAAACAAATAAACTCTTGTCCagtccaaaaaaagaaaaaacaaaacgaaacaaaacaaaaataatattaataataataataataatcggtAGGACTGTGTTCCATCCTGACCAGGATATAAAAGAGCAGTTTTCCTTGTGTCCTGATGGGTTGTACCACCTGTAATCATGGGGAGGACACTACTGTACAATCAAAGGGTTCATATTTGCAAGCACTTACTGCACAGGTGTGCTGTCACATCAAAAACTCATAATCACTCAGAAAGACAAATCAGACCCATTCCCTCCCCATTTCACGCTCGTGCCTTCCGGAGCAGAGACCCTCATTAGTACACCAGAGCTGCTCTGATTCAATCCGTTTCATTAGAAATATAGTACAATGAATCAAAATTCTTTGGGCTTCACCAACACGGCTGACCGGCATCAACGGTGCGAACAGTCAGCTGCTTTCCTGCTCGTCACCTCAGAGGACCAGATCTACGCTAAAAATGAGTTATTAAGCTCCTGGTTTACTTTTAATATCACTCTATGGGTTGCTGTCCACatgtcttttttatatatatttatatatatatattatatatatatttatatatatttttacatttgtttttcatctatACACTCAGACAAGTTCCACAAGATATCACAAGTAGACAGGCCGTATTGTAGGGAAGCTGGTTCCCGACtcactaaaaaaaagaaaaaaaaaaagaaaaaaaaaaaaagttccgaTAGGCAGCTGAAGATTTTTTTCTATAGAGAAATACCAACGTTACGGCACATTTGTATGGAAATTAATCTCAGAATAAATTCAAAGTTTACTTACCTGACATTTGTgatttataaaacatgtttgtcCCAGTTGTATCACACATGCATGAAGCACAAGTGAAGGGGATATTTACACTTTACAGCTATCATACCCATTAAAACAGTCTGTAAGCAGTTTATAAATGGCTCTGTTCCCTTCGATTATTCCCTGAACTCTGGTTTTGACACAGGTATGACAGCTGATTTCGCAGAGACGCTGGGCAGGTGAGCGCACCTGTTTAGAAAATGCCTGTGGGGCGGGACGGGACGGGGAAGAGAGTGGGCCCAGGAACTTCCCTCACTTCCTGCAGGATCCAGACATCTcaatacagaaagaaagagactgaAGGAAGTACTGTACTTCTGTATCCCATTCCGTCGTGATCCCATTCTCTCCGGCTGAACCCAAGGGCAACCACAGACATAGTGCTTACAAAgtgtttcaaaaaaagaaaaaaaaaaaagaagactaaATATTTAGAATACACAAGTATAATATATCAGCATGTCTGGGTGTTCAGTTAGAGAAGAGAAAAGCATCCCTTTGAGTTCATACTCTCTCTATTCCATCACAATATGATCACGGCCCTTTAGTCatgtacgaaaaaaaaaaaaaaaaaaaatattgtagtaattatcCATCAGATTCCTGAGCTCACCAAGCTCGCCCCGGCACAAGGCTCAACACAGTGGAGTAAACATCAGCCCGGAAATGAaggagcagaagaaaaaaaaatcgtttAAAAGCTGTCATTACAAAGAACAGATTTAATCAAACCATCGTCGAGTTCTGGGGAAAACGGTCAATTTCAGGCTCCACTAACGCTTTAATATCAAGAAGGACATCCAATACAATTATTGTCTTGATTCTACCCGTTTTAAGGCTGCGCTCCTGGGCAGCTAACAGGACAGTACCTTGTTACCGTTCAGTCTGAAGAGAATATAGTCATGGAAGGCAGAGGAAGTGCAAGTGGGCTGTCTGCTTTTCAACAACTCCAATGGCGGCCGAAATTGGATTTTgcttaagacaaaaaaaaaaaaaaaaaaaagaaaaaaaaaagctttgcaaAAAAGGATT

Function

symbol description
tex11 Predicted to act upstream of or within meiotic cell cycle. Predicted to be located in chromosome. Human ortholog(s) of this gene implicated in X-linked spermatogenic failure 2. Orthologous to human TEX11 (testis expressed 11).

NR:

description
testis-expressed protein 11

GO: NA

KEGG:

id description
K24574 TEX11; testis-expressed protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257178.1 True 5056 mRNA 0.45 29 21139957 21151490

Neighbor

gene id symbol gene type direction distance location
lnx2b lnx2b,LOC107658117,LOC107744525,LOC107560395,LOC107665436,LOC107751992,LOC107550774 coding upstream 58794 21067247 ~ 21081163 (+)
nkrf nkrf,LOC107744522,LOC107550779,LOC107658110,LOC107751988,LOC107560450 coding upstream 104699 21030533 ~ 21035258 (+)
arr3b arr3,arr3b,LOC107665425 coding upstream 109606 21024552 ~ 21030351 (+)
f9a LOC107744572,LOC107601103,LOC107658031,LOC107752055 coding upstream 340981 20795226 ~ 20798976 (+)
LOC122357533 LOC103473718,LOC103148770,LOC101169050,LOC106514486 coding upstream 517572 20618742 ~ 20622385 (+)
pdzd11 pdzd11,LOC107560372,LOC107752002 coding downstream 88498 21239988 ~ 21241994 (+)
sowahd LOC107658138,LOC107744537,LOC107550745,LOC107561507,LOC107752086,LOC107664331 coding downstream 125537 21277027 ~ 21279192 (+)
zbtb33 LOC107744540,LOC107658128,LOC107550727,LOC107560259 coding downstream 141620 21293110 ~ 21296773 (+)
atp1b4 LOC107658137,LOC107664337,LOC107560232,LOC107550763,LOC107752012,LOC107744544 coding downstream 154923 21306413 ~ 21312695 (+)
cul4b cul4b,LOC107664345,LOC107752014,LOC107550760,LOC107744545 coding downstream 170184 21321674 ~ 21330975 (+)
G101229 NA non-coding upstream 303299 20825405 ~ 20836658 (+)
G101210 NA non-coding upstream 350503 20789160 ~ 20789454 (+)
G101200 NA non-coding upstream 357881 20734733 ~ 20782076 (+)
G101180 NA non-coding upstream 516957 20622623 ~ 20623000 (+)
G101177 NA non-coding upstream 522347 20617269 ~ 20617610 (+)
G101316 NA non-coding downstream 8083 21159573 ~ 21239009 (+)
G101320 dlg3 non-coding downstream 25556 21177046 ~ 21178830 (+)
G101326 stard14,LOC107550772,LOC107744532,LOC107658124,LOC107752001,LOC107664324,LOC107560366 non-coding downstream 90724 21242214 ~ 21247020 (+)
G101336 NA non-coding downstream 103389 21254879 ~ 21256017 (+)
G101322 NA non-coding downstream 104591 21256081 ~ 21280613 (+)
G101250 slc25a5,LOC107658113,LOC103141681,LOC103475848,LOC100712014,LOC107560428,LOC107751991,LOC107744527,LOC107550775,LOC102232717 other upstream 87525 20956794 ~ 21052432 (+)
G101246 sox3,LOC107751983,LOC105029621,LOC106611736 other upstream 160558 20930483 ~ 20979399 (+)
LOC122358150 LOC107692971,LOC107557295,LOC107689229,LOC107746220 other upstream 526423 20600673 ~ 20613534 (+)
G100926 NA other upstream 1789407 19349259 ~ 19350550 (+)
cxcl14 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other upstream 1844775 19290244 ~ 19295182 (+)
ndufa1 NA other downstream 135560 21287050 ~ 21287741 (+)
G101440 NA other downstream 248837 21400327 ~ 21400753 (+)
apln NA other downstream 271222 21422712 ~ 21443698 (+)
tmsb2 NA other downstream 605966 21757456 ~ 21759547 (+)
LOC122357535 wnt8-2,LOC107669112,LOC107743919,LOC107752032,LOC107602559,LOC107664333,LOC107568688,LOC106604410 other downstream 614151 21765641 ~ 21767331 (+)

Expression


Co-expression Network