atp1b4 (LOC107658137,LOC107664337,LOC107560232,LOC107550763,LOC107752012,LOC107744544)


Basic Information

Item Value
gene id atp1b4
gene name LOC107658137,LOC107664337,LOC107560232,LOC107550763,LOC107752012,LOC107744544
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 21306413 ~ 21312695 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257202.1
AACTCCATTCACTATGATGCTCGACTCCTAGCGAGAAGCTCCTCCGCACCCGACATCCGCCGTAAGGAGAAAACTCAATGAAATTCAACGAATCCCGACCGAAATTAACGTTTGCGCAGCCAGCGTGAACCCGAAGACACCGCCTGAGTGCATTCATCAAGactttattttttggggggcaCTTTAAGTATAAAAGTTTTTTCCTAAGGCTCCCCCCTCCACATTTTTCTTTAGAGAAGACATCGAAATATTCTCTcatcttctttatttttttttgaaaggcaTATAAAAAGCCTGAACAattatttcacacaatatttgaCTTTCCTGGACTTCGGCAGACTTTATTCGTGGACTGAAATATCGCAGTAAATCGCCTGGACCGCTCGTATATGTGATTGGTTTAACAAGTACCTTTATTCTTCAGTGAGAGATCATGGAGCGCGACTCTACCGCGGGAGGGGCGGAGGACCTGCTCCTGGAAGACAAAGTTTCAAAACTGCGTGCAGGATCACTTCACAAACACGAACTAGCCGAGGCCATGGAGGTGGAACAGGAAAGACTGGTAGAACATCAGCCTCTGGAGCAGGACGACCTTAACTTTGAGAAATGGAAGCCCAAGCCAATACCTAAGAGGACGCTGCATGAGAAAATCGACGACTTAAAGACTTACCTGTGGAACGCAGAGACTAAGGAGTTTATGGGCCGCTCGGGAAAGAGCTGGAGCCTCATTCTGCTCTTCTACTCAGCGTTATACATTTTCCTCGCGGCCATGTTTGCTGGATGTATGTGCTGCCTGATGTGGTCAATAAGTCCATATGCTCCAACCTACAATGACAGAGTGATGCCACCAGGGATGACCATGTTTCCTCATGTAGATGTAGCTCATGGGTTTGACATTGCTTTCAACGCCTCTGACCGAAGCTCGTGGAGGAAGTACGCGAAAGCACTGGAAGCCCATCTGAAACCCTATGACGACGGAGTGCAGGATAGGCGGAACATTCACTGCGAAGGAAATACGTATTTCATGCAAGATGACTTGGAGGAGAGTGCCGAGCGCAAGGCATGTCAGTTTAAGAGGTCCTGGCTGGGTGAATGCTCCGGCATGAAGGACAAAGATTTTGGCTACTCAAAGGGAAAACCCTGCATCCTCGTCAAAATGAATCGGATTCTCGGGTATCTGCCTGGTCAAGGCACTCCAGTAAATGTTACGTGTGGAGTAAAGAAAGGGTCAACTGAAGGCCTCGGAGAAGTCCAGTTTTTACCAGAAAATATCTTCAACTTGCGGTACTATCCCTATTATGGGAAACTGAGACATGTAAACTACTCTTCTCCGCTGGTGGCTGTGCGCTTTCCCAGTGTCCAGTACGACACCCAACTACATGTTCAATGCAAACTACACGGCAAGGGCATCATCAACGATTCACCAACCGACCGTTTCCTGGGTAGCGTGTCTTTCACTTTAGAAGTGGGTGCGTAGGGTGGCCGTAGACCTAgagaaattgaaattaaaattctcaaGAGTATggtataataaaagaaatagcaCACTGGGTGTTGTCTTTACCCATTAGCCCTCTGATTAAGCCTCCGGCAGCCACTGTGCTATTCGTGACAGAGCCGTGTTACTACACTACTTTTTCAAACAAGGAATTTCCCAGTAAGCAAAGACTGAGATACATAGATCACTTTTAGAGATCAGCCGCTAGAGACCGACACCTGCCTGGGTTTTCATTGTAGGatacaacaaaatatgaaaagatgTCCAAATACTGAACGTAGGTCACAATTATAGCTATTGAGGCATAATCACTCGAACGTACGGTCTACAGTGAGACGTAGCCAAAACAATTCTCTAGAGCTGTGTAGATTGTagaattaacatttattaaaccttTTTGATCGGTTCTAAGTCAGATGTGTATATAACACgaattaaaacagaacaaatatttttttatgattttttctCAGTTAAGTCAGTCTCCTTTAAAATCCCCCTCTGGATGAAGAGAAAGGCAGAAAACTGCTTAACATTATCCTTTCGCTTGCTTGTTTAATTGAATAACAATCAGAAGTGGTTTAGAACTTAATCATTGATTGTACATTtgactaaattttttttttcttcctctgatGTGCAACTAAATTTTTAATTCAGACGCAAATGTATTTTACTGAAATGCGGGACAGATCTCCCATTTCATCATTTTCACAAAGCTTCATAACGCAATACGAGTTGATCTGTCTATCGTCAAGCATGCAACCAACGCTTCTCAAACTAAATAGAGTATGTCACAATTCATctctaaatgtgaaaatatctgCTCAATTGCCTGTAAGGAGGATTTcaacagtattatttattaattgtatatgaatatattgacATGGTACAAACGGTTACAAAGTGTAATAGTGAGATGGAAATTGGTAACTGCACATCTTtgttattcagtaaatgcatcaaaatatcCACTGGCTGACAAAGATTTGCCAGCTCATGTTTTTAAAACGCACTCATGTTCTAGCATAAATAAAGATGGATGAGAATTAACGGAATCAAA

Function

NR:

description
PREDICTED: protein ATP1B4

GO: NA

KEGG:

id description
K01540 ATP1B, CD298; sodium/potassium-transporting ATPase subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257202.1 True 2567 mRNA 0.42 8 21306413 21312695

Neighbor

gene id symbol gene type direction distance location
zbtb33 LOC107744540,LOC107658128,LOC107550727,LOC107560259 coding upstream 9640 21293110 ~ 21296773 (+)
sowahd LOC107658138,LOC107744537,LOC107550745,LOC107561507,LOC107752086,LOC107664331 coding upstream 27221 21277027 ~ 21279192 (+)
pdzd11 pdzd11,LOC107560372,LOC107752002 coding upstream 64419 21239988 ~ 21241994 (+)
tex11 tex11 coding upstream 154923 21139957 ~ 21151490 (+)
lnx2b lnx2b,LOC107658117,LOC107744525,LOC107560395,LOC107665436,LOC107751992,LOC107550774 coding upstream 225250 21067247 ~ 21081163 (+)
cul4b cul4b,LOC107664345,LOC107752014,LOC107550760,LOC107744545 coding downstream 8979 21321674 ~ 21330975 (+)
mcts1 mcts1,LOC107550743,LOC107664321,LOC107561487 coding downstream 18946 21331641 ~ 21334268 (+)
zdhhc9 zdhhc9,LOC107744547,LOC107752016,LOC105893011 coding downstream 27670 21340365 ~ 21364666 (+)
clic2 clic2,LOC107658143,LOC107550754,LOC107664358,LOC107560166 coding downstream 186460 21499155 ~ 21504865 (+)
LOC122358007 NA coding downstream 215759 21528454 ~ 21530829 (+)
G101341 NA non-coding upstream 23316 21281835 ~ 21283097 (+)
G101322 NA non-coding upstream 25800 21256081 ~ 21280613 (+)
G101336 NA non-coding upstream 50396 21254879 ~ 21256017 (+)
G101326 stard14,LOC107550772,LOC107744532,LOC107658124,LOC107752001,LOC107664324,LOC107560366 non-coding upstream 59393 21242214 ~ 21247020 (+)
G101320 dlg3 non-coding upstream 127583 21177046 ~ 21178830 (+)
G101441 NA non-coding downstream 88284 21400979 ~ 21401346 (+)
G101443 NA non-coding downstream 89673 21402368 ~ 21402618 (+)
G101454 NA non-coding downstream 107163 21419858 ~ 21421575 (+)
G101455 NA non-coding downstream 109504 21422199 ~ 21422446 (+)
G101476 NA non-coding downstream 138274 21450969 ~ 21508931 (+)
ndufa1 NA other upstream 18672 21287050 ~ 21287741 (+)
G101250 slc25a5,LOC107658113,LOC103141681,LOC103475848,LOC100712014,LOC107560428,LOC107751991,LOC107744527,LOC107550775,LOC102232717 other upstream 253981 20956794 ~ 21052432 (+)
G101246 sox3,LOC107751983,LOC105029621,LOC106611736 other upstream 327014 20930483 ~ 20979399 (+)
LOC122358150 LOC107692971,LOC107557295,LOC107689229,LOC107746220 other upstream 692879 20600673 ~ 20613534 (+)
G100926 NA other upstream 1955863 19349259 ~ 19350550 (+)
G101440 NA other downstream 87632 21400327 ~ 21400753 (+)
apln NA other downstream 110017 21422712 ~ 21443698 (+)
tmsb2 NA other downstream 444761 21757456 ~ 21759547 (+)
LOC122357535 wnt8-2,LOC107669112,LOC107743919,LOC107752032,LOC107602559,LOC107664333,LOC107568688,LOC106604410 other downstream 452946 21765641 ~ 21767331 (+)
gria2b gria2b,gria2,LOC107554451,LOC107723812,LOC107740107,LOC107669079,LOC108411138,LOC107662960 other downstream 969596 22282291 ~ 22310841 (+)

Expression


Co-expression Network