G1017


Basic Information

Item Value
gene id G1017
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 3294576 ~ 3294782 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU1375
ctccaaaccatcactgattggtgaaaacttcacactagacctcgagcagtttggactgtgtgtctctccactcttcctccagactctgctcccttgatttacaaatgaaatgtaaaatgtactgatgatcagtgatggtttggagagacatgtcatctgctggtgttgatccactgtgttttattatcaagtctaaagtcagtgcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1375 True 207 lncRNA 0.35 1 3294576 3294782

Neighbor

gene id symbol gene type direction distance location
LOC103033918 LOC108431152,LOC106599103,LOC106568909,LOC108278312 coding downstream 77555 3189007 ~ 3217021 (-)
LOC111193343 prg4 coding downstream 114982 3163711 ~ 3179594 (-)
c1h1orf27 cunh1orf27,LOC103031066 coding downstream 179807 3099846 ~ 3114769 (-)
LOC103034573 pla2g4a,LOC107718137,LOC107677770,LOC107693742,LOC107722605,LOC107589895,LOC107594671 coding downstream 257742 2986333 ~ 3036834 (-)
LOC103032964 LOC108444491,LOC107722586,LOC107718136,LOC107693739,LOC107589867 coding downstream 366510 2916789 ~ 2928066 (-)
olfml2b olfml2b,LOC107718167 coding upstream 3031 3297813 ~ 3316021 (-)
LOC103033290 NA coding upstream 81828 3376610 ~ 3383122 (-)
LOC103028436 NA coding upstream 196090 3490872 ~ 3503293 (-)
LOC103032346 NA coding upstream 221842 3516624 ~ 3554189 (-)
LOC103032017 LOC108441573,LOC107693752 coding upstream 309404 3604186 ~ 3666404 (-)
G1016 NA non-coding downstream 4658 3289505 ~ 3289918 (-)
G990 NA non-coding downstream 106594 3187503 ~ 3187982 (-)
G977 pdc,pdca,LOC108277616,LOC107693745,LOC107594646 non-coding downstream 145364 3092945 ~ 3149212 (-)
G963 NA non-coding downstream 233377 3060943 ~ 3061199 (-)
G958 NA non-coding downstream 244821 3049408 ~ 3049755 (-)
G1013 NA non-coding upstream 1458 3296240 ~ 3297646 (-)
G1211 NA non-coding upstream 74021 3368803 ~ 3373615 (-)
G1214 NA non-coding upstream 90591 3385373 ~ 3386231 (-)
G1224 NA non-coding upstream 179407 3474189 ~ 3474864 (-)
G1238 NA non-coding upstream 283447 3578229 ~ 3585540 (-)
LOC103032016 arpc5b,arpc5,LOC103032016,LOC108431159,LOC104921830,LOC107698380,LOC107599090,LOC103045524 other downstream 324236 2910754 ~ 2970340 (-)
G807 NA other downstream 694065 2550216 ~ 2600511 (-)
znf414 NA other downstream 860175 2423713 ~ 2434401 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other downstream 1366321 1920480 ~ 1928255 (-)
yipf1 yipf1 other downstream 1421449 1864515 ~ 1873127 (-)
LOC103029371 agl,LOC108441576,LOC107722579 other upstream 99422 3394204 ~ 3445386 (-)
wdfy1 wdfy1,LOC106613124,LOC102785143,LOC103370589 other upstream 587588 3882370 ~ 3909671 (-)
G1308 NA other upstream 804983 4099765 ~ 4101566 (-)
LOC111193794 LOC108442858 other upstream 972219 4267001 ~ 4271970 (-)
LOC111193783 LOC108442858 other upstream 982127 4276909 ~ 4321340 (-)

Expression


Co-expression Network